RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 ZCWPW1Q9H0M4 648 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 NGRNQ9NPE2 291 aaKnown RBP21.56■■□□□ 1.04
TMEM53-207ENST00000468117 AMACRQ9UHK6 382 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 PTPRSQ13332 1948 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 RARAP10276 462 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 TFE3P19532 575 aaPredicted RBP21.56■■□□□ 1.04
TMEM53-207ENST00000468117 PCK1P35558 622 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 SIX1Q15475 284 aaPredicted RBP21.56■■□□□ 1.04
TMEM53-207ENST00000468117 ODF2Q5BJF6 829 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 RAB41Q5JT25 222 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 WDR93Q6P2C0 686 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 MFSD7Q6UXD7 560 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 RCOR2Q8IZ40 523 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 FAM172AQ8WUF8 416 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 RBM41Q96IZ5 413 aaKnown RBP21.56■■□□□ 1.04
TMEM53-207ENST00000468117 SLITRK1Q96PX8 696 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 PEBP4Q96S96 227 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 OSBPL8Q9BZF1 889 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 DMAP1Q9NPF5 467 aaPredicted RBP21.56■■□□□ 1.04
TMEM53-207ENST00000468117 ARGLU1Q9NWB6 273 aaPredicted RBP21.56■■□□□ 1.04
TMEM53-207ENST00000468117 DDX56Q9NY93 547 aaKnown RBP21.56■■□□□ 1.04
TMEM53-207ENST00000468117 STIM2Q9P246 746 aa21.56■■□□□ 1.04
TMEM53-207ENST00000468117 LRRD1A4D1F6 860 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 KRT7P08729 469 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 FGFR3P22607 806 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 CYP2F1P24903 491 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 ALDH7A1P49419 539 aaKnown RBP21.55■■□□□ 1.04
TMEM53-207ENST00000468117 CTXN3Q4LDR2 81 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 C4orf50Q6ZRC1 276 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 ARCQ7LC44 396 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 ADAM33Q9BZ11 813 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 CWH43Q9H720 699 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 MTUS1Q9ULD2 1270 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 ZSCAN5CA6NGD5 496 aaPredicted RBP21.55■■□□□ 1.04
TMEM53-207ENST00000468117 HSF2BPO75031 334 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 HEXIM1O94992 359 aaKnown RBP21.55■■□□□ 1.04
TMEM53-207ENST00000468117 TRUB2O95900 331 aaKnown RBP21.55■■□□□ 1.04
TMEM53-207ENST00000468117 AMHP03971 560 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 GLI1P08151 1106 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 CAPN2P17655 700 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 WDR5P61964 334 aaKnown RBP21.55■■□□□ 1.04
TMEM53-207ENST00000468117 MRPL58Q14197 206 aaKnown RBP21.55■■□□□ 1.04
TMEM53-207ENST00000468117 UBXN6Q9BZV1 441 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 SLITRK6Q9H5Y7 841 aa21.55■■□□□ 1.04
TMEM53-207ENST00000468117 USP17L7P0C7H9 530 aa21.54■■□□□ 1.04
TMEM53-207ENST00000468117 KRT10P13645 584 aa21.54■■□□□ 1.04
TMEM53-207ENST00000468117 YWHAZP63104 245 aaKnown RBP21.54■■□□□ 1.04
TMEM53-207ENST00000468117 RTP2Q5QGT7 225 aa21.54■■□□□ 1.04
TMEM53-207ENST00000468117 HFE2Q6ZVN8 426 aa21.54■■□□□ 1.04
TMEM53-207ENST00000468117 TAS1R1Q7RTX1 841 aa21.54■■□□□ 1.04
TMEM53-207ENST00000468117 UBE2Q1Q7Z7E8 422 aa21.54■■□□□ 1.04
TMEM53-207ENST00000468117 DCP1BQ8IZD4 617 aaKnown RBP21.54■■□□□ 1.04
TMEM53-207ENST00000468117 DEFB106AQ8N104 65 aa21.54■■□□□ 1.04
TMEM53-207ENST00000468117 CNGB3Q9NQW8 809 aa21.54■■□□□ 1.04
TMEM53-207ENST00000468117 ABI2Q9NYB9 513 aaPredicted RBP21.54■■□□□ 1.04
TMEM53-207ENST00000468117 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.54■■□□□ 1.04
TMEM53-207ENST00000468117 CCDC151A5D8V7 595 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 PHF2O75151 1096 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 TUBBP07437 444 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 PTPN9P43378 593 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 DAOAP59103 153 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 ELAVL2Q12926 359 aaKnown RBP21.53■■□□□ 1.04
TMEM53-207ENST00000468117 KLF1Q13351 362 aaPredicted RBP21.53■■□□□ 1.04
TMEM53-207ENST00000468117 KAZNQ674X7 775 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 ZNF280DQ6N043 979 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 SCYL2Q6P3W7 929 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 SPOCD1Q6ZMY3 1216 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 CYP4V2Q6ZWL3 525 aaPredicted RBP21.53■■□□□ 1.04
TMEM53-207ENST00000468117 OTOP2Q7RTS6 562 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 HSPH1Q92598 858 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 MAGOHBQ96A72 148 aaKnown RBP21.53■■□□□ 1.04
TMEM53-207ENST00000468117 C11orf84Q9BUA3 381 aaPredicted RBP21.53■■□□□ 1.04
TMEM53-207ENST00000468117 DDX23Q9BUQ8 820 aaKnown RBP21.53■■□□□ 1.04
TMEM53-207ENST00000468117 YJEFN3A6XGL0 299 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 E7ENQ6 273 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 PRPSAP2O60256 369 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 FBXO21O94952 628 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 GRIK1P39086 918 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 CETN2P41208 172 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 MATKP42679 507 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 HDAC4P56524 1084 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 ADCY2Q08462 1091 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 BRD3Q15059 726 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 DCAF6Q58WW2 860 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 ZNF689Q96CS4 500 aaPredicted RBP21.53■■□□□ 1.04
TMEM53-207ENST00000468117 PGLYRP2Q96PD5 576 aa21.53■■□□□ 1.04
TMEM53-207ENST00000468117 MYO16Q9Y6X6 1858 aa21.52■■□□□ 1.04
TMEM53-207ENST00000468117 C3orf70A6NLC5 250 aaPredicted RBP21.52■■□□□ 1.04
TMEM53-207ENST00000468117 TTI1O43156 1089 aa21.52■■□□□ 1.04
TMEM53-207ENST00000468117 ZBED1O96006 694 aa21.52■■□□□ 1.04
TMEM53-207ENST00000468117 DESP17661 470 aa21.52■■□□□ 1.04
TMEM53-207ENST00000468117 ATXN1P54253 815 aaKnown RBP21.52■■□□□ 1.04
TMEM53-207ENST00000468117 GUCY2DQ02846 1103 aa21.52■■□□□ 1.04
TMEM53-207ENST00000468117 PPP2R5EQ16537 467 aa21.52■■□□□ 1.04
TMEM53-207ENST00000468117 SPOUT1Q5T280 376 aaKnown RBP21.52■■□□□ 1.04
TMEM53-207ENST00000468117 TTC27Q6P3X3 843 aa21.52■■□□□ 1.04
TMEM53-207ENST00000468117 CCDC26Q8TAB7 109 aa21.52■■□□□ 1.04
TMEM53-207ENST00000468117 C1orf54Q8WWF1 131 aa21.52■■□□□ 1.04
TMEM53-207ENST00000468117 ESYT3A0FGR9 886 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 DAB1O75553 588 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms