RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 KCNT1Q5JUK3 1230 aa15.13■□□□□ 0.01
SEC16A-208ENST00000467838 TTC39BQ5VTQ0 682 aaPredicted RBP15.13■□□□□ 0.01
SEC16A-208ENST00000467838 XYLT1Q86Y38 959 aa15.13■□□□□ 0.01
SEC16A-208ENST00000467838 TTC17Q96AE7 1141 aa15.13■□□□□ 0.01
SEC16A-208ENST00000467838 SRPK1Q96SB4 655 aaKnown RBP15.13■□□□□ 0.01
SEC16A-208ENST00000467838 SYT17Q9BSW7 474 aa15.13■□□□□ 0.01
SEC16A-208ENST00000467838 RSAD1Q9HA92 442 aa15.13■□□□□ 0.01
SEC16A-208ENST00000467838 DDX43Q9NXZ2 648 aaKnown RBP15.13■□□□□ 0.01
SEC16A-208ENST00000467838 SIRPGQ9P1W8 387 aa15.13■□□□□ 0.01
SEC16A-208ENST00000467838 PLA2G4CQ9UP65 541 aa15.13■□□□□ 0.01
SEC16A-208ENST00000467838 IKBKGQ9Y6K9 419 aa15.13■□□□□ 0.01
SEC16A-208ENST00000467838 EME2A4GXA9 379 aaPredicted RBP15.12■□□□□ 0.01
SEC16A-208ENST00000467838 TOM1L1O75674 476 aa15.12■□□□□ 0.01
SEC16A-208ENST00000467838 ROR1Q01973 937 aa15.12■□□□□ 0.01
SEC16A-208ENST00000467838 GSTA3Q16772 222 aa15.12■□□□□ 0.01
SEC16A-208ENST00000467838 DUOXA2Q1HG44 320 aa15.12■□□□□ 0.01
SEC16A-208ENST00000467838 HSF5Q4G112 596 aaPredicted RBP15.12■□□□□ 0.01
SEC16A-208ENST00000467838 SEZ6Q53EL9 994 aa15.12■□□□□ 0.01
SEC16A-208ENST00000467838 RFX6Q8HWS3 928 aa15.12■□□□□ 0.01
SEC16A-208ENST00000467838 UCMAQ8WVF2 138 aa15.12■□□□□ 0.01
SEC16A-208ENST00000467838 STMN2Q93045 179 aa15.12■□□□□ 0.01
SEC16A-208ENST00000467838 TRAPPC9Q96Q05 1148 aa15.12■□□□□ 0.01
SEC16A-208ENST00000467838 KRT82Q9NSB4 513 aa15.12■□□□□ 0.01
SEC16A-208ENST00000467838 DNAJB4Q9UDY4 337 aa15.12■□□□□ 0.01
SEC16A-208ENST00000467838 ZNF214Q9UL59 606 aaPredicted RBP15.12■□□□□ 0.01
SEC16A-208ENST00000467838 PLLPQ9Y342 182 aa15.12■□□□□ 0.01
SEC16A-208ENST00000467838 EIF4E1BA6NMX2 242 aaKnown RBP15.11■□□□□ 0.01
SEC16A-208ENST00000467838 COPEO14579 308 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 OGTO15294 1046 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 MAP3K13O43283 966 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 MED7O43513 233 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 MSCO60682 206 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 TRUB2O95900 331 aaKnown RBP15.11■□□□□ 0.01
SEC16A-208ENST00000467838 HOXC6P09630 235 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 PRKCHP24723 683 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 RPS12P25398 132 aaKnown RBP15.11■□□□□ 0.01
SEC16A-208ENST00000467838 MIPP30301 263 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 GABRB2P47870 512 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 SESN3P58005 492 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 PSMC1P62191 440 aaKnown RBP15.11■□□□□ 0.01
SEC16A-208ENST00000467838 YWHAZP63104 245 aaKnown RBP15.11■□□□□ 0.01
SEC16A-208ENST00000467838 RCN2Q14257 317 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 TBCCQ15814 346 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 ZNF699Q32M78 642 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 ZNF394Q53GI3 561 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 SNRNP48Q6IEG0 339 aaKnown RBP15.11■□□□□ 0.01
SEC16A-208ENST00000467838 CDHR3Q6ZTQ4 885 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 NET1Q7Z628 596 aaPredicted RBP15.11■□□□□ 0.01
SEC16A-208ENST00000467838 TMPRSS6Q8IU80 811 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 SCYL3Q8IZE3 742 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 SLC4A11Q8NBS3 891 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 SPDYE1Q8NFV5 336 aaPredicted RBP15.11■□□□□ 0.01
SEC16A-208ENST00000467838 SPATA18Q8TC71 538 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 ZFAND2BQ8WV99 257 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 GATA6Q92908 595 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 MCRS1Q96EZ8 462 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 TSC22D3Q99576 134 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 TJP2Q9UDY2 1190 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 CPSF3Q9UKF6 684 aaKnown RBP15.11■□□□□ 0.01
SEC16A-208ENST00000467838 GJA3Q9Y6H8 435 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 TTLL13PA6NNM8 815 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 ENO4A6NNW6 628 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 PGM1P36871 562 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 EFNA5P52803 228 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 SP2Q02086 613 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 CNTN2Q02246 1040 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 TRMT5Q32P41 509 aaKnown RBP15.11■□□□□ 0.01
SEC16A-208ENST00000467838 NBPF20Q3BBV1 942 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 SLC30A9Q6PML9 568 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 CYP4V2Q6ZWL3 525 aaPredicted RBP15.11■□□□□ 0.01
SEC16A-208ENST00000467838 ALYREFQ86V81 257 aaKnown RBP15.11■□□□□ 0.01
SEC16A-208ENST00000467838 KCTD6Q8NC69 237 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 CCDC110Q8TBZ0 833 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 TEKT4Q8WW24 435 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 CPXM1Q96SM3 734 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 ZNF184Q99676 751 aaPredicted RBP15.11■□□□□ 0.01
SEC16A-208ENST00000467838 MRPL4Q9BYD3 311 aaKnown RBP15.11■□□□□ 0.01
SEC16A-208ENST00000467838 BCO2Q9BYV7 579 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 PLAC1Q9HBJ0 212 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 POPDC2Q9HBU9 364 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 MYOZ2Q9NPC6 264 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 METTL5Q9NRN9 209 aaKnown RBP15.11■□□□□ 0.01
SEC16A-208ENST00000467838 SCOCQ9UIL1 159 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 ANGPTL2Q9UKU9 493 aa15.11■□□□□ 0.01
SEC16A-208ENST00000467838 FAM237BA0A1B0GVD1 139 aa15.1■□□□□ 0.01
SEC16A-208ENST00000467838 TRIM49D1C9J1S8 452 aa15.1■□□□□ 0.01
SEC16A-208ENST00000467838 I3L4J1 428 aa15.1■□□□□ 0.01
SEC16A-208ENST00000467838 TRDMT1O14717 391 aaKnown RBP15.1■□□□□ 0.01
SEC16A-208ENST00000467838 SNNO75324 88 aaPredicted RBP15.1■□□□□ 0.01
SEC16A-208ENST00000467838 KRT37O76014 449 aa15.1■□□□□ 0.01
SEC16A-208ENST00000467838 ERBB2P04626 1255 aa15.1■□□□□ 0.01
SEC16A-208ENST00000467838 SNRPAP09012 282 aaKnown RBP15.1■□□□□ 0.01
SEC16A-208ENST00000467838 HARSP12081 509 aaKnown RBP15.1■□□□□ 0.01
SEC16A-208ENST00000467838 GMPSP49915 693 aaPredicted RBP15.1■□□□□ 0.01
SEC16A-208ENST00000467838 YWHAGP61981 247 aaKnown RBP eCLIP15.1■□□□□ 0.01
SEC16A-208ENST00000467838 MRPS5P82675 430 aaKnown RBP15.1■□□□□ 0.01
SEC16A-208ENST00000467838 DBN1Q16643 649 aa15.1■□□□□ 0.01
SEC16A-208ENST00000467838 FAM47CQ5HY64 1035 aa15.1■□□□□ 0.01
SEC16A-208ENST00000467838 ATG16L1Q676U5 607 aa15.1■□□□□ 0.01
SEC16A-208ENST00000467838 TREML1Q86YW5 311 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms