RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-216	ENST00000467134	SOD2	P04179	222 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	FLT3	P36888	993 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	TKTL1	P51854	596 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	AIF1	P55008	147 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	YWHAZ	P63104	245 aa	Known RBP	11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	DSG1	Q02413	1049 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	BTG3	Q14201	252 aa	Predicted RBP	11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	SLC25A52	Q3SY17	297 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	BOLA3	Q53S33	107 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	TRNP1	Q6NT89	227 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	PHLDB2	Q86SQ0	1253 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	DDX53	Q86TM3	631 aa	Known RBP	11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	SCUBE3	Q8IX30	993 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	EIF1AD	Q8N9N8	165 aa	Known RBP	11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	C12orf50	Q8NA57	414 aa	Predicted RBP	11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	COLGALT1	Q8NBJ5	622 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	CMAS	Q8NFW8	434 aa	Predicted RBP	11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	FAM71B	Q8TC56	605 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	RXFP2	Q8WXD0	754 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	ANKRD7	Q92527	254 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	PGAP3	Q96FM1	320 aa	Predicted RBP	11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	SPATA17	Q96L03	361 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	TMLHE	Q9NVH6	421 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	SPG21	Q9NZD8	308 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	IL37	Q9NZH6	218 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	STAP1	Q9ULZ2	295 aa		11.53	□□□□□ -0.56
MUC1-216	ENST00000467134	FAM92A	A1XBS5	289 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	TNFRSF10B	O14763	440 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	MDM4	O15151	490 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	BEST1	O76090	585 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	UPP2	O95045	317 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	GJB6	O95452	261 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	ZBED1	O96006	694 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	FGG	P02679	453 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	PYGM	P11217	842 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	BDNF	P23560	247 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	ZNF135	P52742	658 aa	Predicted RBP	11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	RPL10A	P62906	217 aa	Known RBP	11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	CCDC142	Q17RM4	750 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	LONRF2	Q1L5Z9	754 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	ERCC6L	Q2NKX8	1250 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	CCDC14	Q49A88	953 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	RTP2	Q5QGT7	225 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	TEX35	Q5T0J7	233 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	TPGS2	Q68CL5	300 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	WDR93	Q6P2C0	686 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	C16orf59	Q7L2K0	433 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	ARHGAP18	Q8N392	663 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	ARFGAP1	Q8N6T3	406 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	EMC1	Q8N766	993 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	NOA1	Q8NC60	698 aa	Known RBP	11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	SLCO2A1	Q92959	643 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	CLP1	Q92989	425 aa	Known RBP	11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	TMEM169	Q96HH4	297 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	PIWIL1	Q96J94	861 aa	Known RBP	11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	MS4A14	Q96JA4	679 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	NPY6R	Q99463	290 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	FBXO44	Q9H4M3	255 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	POPDC2	Q9HBU9	364 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	RBM12	Q9NTZ6	932 aa	Known RBP	11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	TMEM30A	Q9NV96	361 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	RAB21	Q9UL25	225 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	SSX2IP	Q9Y2D8	614 aa		11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	MRPL42	Q9Y6G3	142 aa	Known RBP	11.52	□□□□□ -0.57
MUC1-216	ENST00000467134	KRIT1	O00522	736 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	PRPSAP2	O60256	369 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	PHF2	O75151	1096 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	RTN3	O95197	1032 aa	Predicted RBP	11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	TRUB2	O95900	331 aa	Known RBP	11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	C1R	P00736	705 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	F9	P00740	461 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	LTF	P02788	710 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	KRT1	P04264	644 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	HAPLN1	P10915	354 aa	Predicted RBP	11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	LCP1	P13796	627 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	TNFRSF8	P28908	595 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	MIP	P30301	263 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	CHRNA3	P32297	505 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	FNTA	P49354	379 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	GLUD2	P49448	558 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	DNA2	P51530	1060 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	CACNA2D1	P54289	1103 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	KLF1	Q13351	362 aa	Predicted RBP	11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	DHX34	Q14147	1143 aa	Known RBP	11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	PDK2	Q15119	407 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	SIX1	Q15475	284 aa	Predicted RBP	11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	PSMD5	Q16401	504 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	SLC39A12	Q504Y0	691 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	TFDP3	Q5H9I0	405 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	TMEM240	Q5SV17	173 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	RASIP1	Q5U651	963 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	DRICH1	Q6PGQ1	229 aa	Predicted RBP	11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	ZNF365	Q70YC5	407 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	BHLHA9	Q7RTU4	235 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	MAATS1	Q7Z4T9	603 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	TMEM173	Q86WV6	379 aa	Predicted RBP	11.51	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms