RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 YTHDF3Q7Z739 585 aaKnown RBP4.3□□□□□ -1.72
CCDC58-203ENST00000466854 LRRC71Q8N4P6 559 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 TBC1D5Q92609 795 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 GLG1Q92896 1179 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 RPL36ALQ969Q0 106 aaKnown RBP4.3□□□□□ -1.72
CCDC58-203ENST00000466854 PPP2R3CQ969Q6 453 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 TIFAQ96CG3 184 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 SH2D3AQ9BRG2 576 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 DPCDQ9BVM2 203 aaPredicted RBP4.3□□□□□ -1.72
CCDC58-203ENST00000466854 APOL5Q9BWW9 433 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 QTRT1Q9BXR0 403 aaKnown RBP4.3□□□□□ -1.72
CCDC58-203ENST00000466854 ZNF518BQ9C0D4 1074 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 BHMT2Q9H2M3 363 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 GLOD4Q9HC38 313 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 DLL3Q9NYJ7 618 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 HDAC9Q9UKV0 1011 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 SSX2IPQ9Y2D8 614 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 PCDHGB6Q9Y5F9 930 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 SYNJ1O43426 1573 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 TSPOAP1O95153 1857 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 A0A087WWL8 130 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 GOLIM4O00461 696 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 RGS10O43665 173 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 WDHD1O75717 1129 aaPredicted RBP4.29□□□□□ -1.72
CCDC58-203ENST00000466854 RASAL1O95294 804 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 ZBED1O96006 694 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 FESP07332 822 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 IL6RP08887 468 aaPredicted RBP4.29□□□□□ -1.72
CCDC58-203ENST00000466854 SFPQP23246 707 aaKnown RBP eCLIP4.29□□□□□ -1.72
CCDC58-203ENST00000466854 PEX2P28328 305 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 ADORA2AP29274 412 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 CTGFP29279 349 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 PPIFP30405 207 aaKnown RBP4.29□□□□□ -1.72
CCDC58-203ENST00000466854 CYP2C18P33260 490 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 ARFIP2P53365 341 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 ITGA8P53708 1063 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 TUBA4AP68366 448 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 FAM193AP78312 1265 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 BIRC2Q13490 618 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 AARS2Q5JTZ9 985 aaKnown RBP4.29□□□□□ -1.72
CCDC58-203ENST00000466854 PRAMEF17Q5VTA0 474 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 CACHD1Q5VU97 1274 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 ANKRD16Q6P6B7 361 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 RINLQ6ZS11 566 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 SLC29A4Q7RTT9 530 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 DTX2Q86UW9 622 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 CCAR1Q8IX12 1150 aaKnown RBP4.29□□□□□ -1.72
CCDC58-203ENST00000466854 SPARTQ8N0X7 666 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 TMEM171Q8WVE6 324 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 OSCP1Q8WVF1 389 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 ATG4AQ8WYN0 398 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 ZBTB9Q96C00 473 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 R3HDM4Q96D70 268 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 A1CFQ9NQ94 594 aaKnown RBP4.29□□□□□ -1.72
CCDC58-203ENST00000466854 ITGB1BP2Q9UKP3 347 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 SNX13Q9Y5W8 968 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 ADGRL1O94910 1474 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 IFT140Q96RY7 1462 aa4.29□□□□□ -1.72
CCDC58-203ENST00000466854 CCDC189A1A4V9 331 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 A1L4Q6 167 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 ISM1B1AKI9 464 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 PYCARD-AS1I3L0S3 204 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 SMIM22K7EJ46 135 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 MYO1FO00160 1098 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 MOSPD3O75425 235 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 CYP2D6P10635 497 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 MYF5P13349 255 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 ENGP17813 658 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 CERS1P27544 350 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 PTGER1P34995 402 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 PDE6CP51160 858 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 DGKEP52429 567 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 WNT3P56703 355 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 RPS16P62249 146 aaKnown RBP4.28□□□□□ -1.72
CCDC58-203ENST00000466854 FMO1Q01740 532 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 UBE4AQ14139 1066 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 GBX1Q14549 363 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 POLD3Q15054 466 aaPredicted RBP4.28□□□□□ -1.72
CCDC58-203ENST00000466854 ZIK1Q3SY52 487 aaPredicted RBP4.28□□□□□ -1.72
CCDC58-203ENST00000466854 MAP9Q49MG5 647 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 CCDC184Q52MB2 194 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 PCID2Q5JVF3 399 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 SLC18B1Q6NT16 456 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 ZDHHC24Q6UX98 284 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 FANCBQ8NB91 859 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 BPIFB1Q8TDL5 484 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 SPSB4Q96A44 273 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 PPP1R9BQ96SB3 815 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 MESP1Q9BRJ9 268 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 KRTAP4-4Q9BYR3 166 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 CXorf36Q9H7Y0 433 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 SMURF2Q9HAU4 748 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 GBA2Q9HCG7 927 aaPredicted RBP4.28□□□□□ -1.72
CCDC58-203ENST00000466854 TRMT13Q9NUP7 481 aaKnown RBP4.28□□□□□ -1.72
CCDC58-203ENST00000466854 GEMIN8Q9NWZ8 242 aaKnown RBP4.28□□□□□ -1.72
CCDC58-203ENST00000466854 STK32BQ9NY57 414 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 AFF4Q9UHB7 1163 aaKnown RBP4.28□□□□□ -1.72
CCDC58-203ENST00000466854 FBXO9Q9UK97 447 aaPredicted RBP4.28□□□□□ -1.72
CCDC58-203ENST00000466854 FAM50BQ9Y247 325 aa4.28□□□□□ -1.72
CCDC58-203ENST00000466854 DISP3Q9P2K9 1392 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms