RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 ATXN8OSP0DMR3 200 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 NRIP1P48552 1158 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 ARL4CP56559 192 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 SLC20A2Q08357 652 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 XRCC4Q13426 336 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 HNRNPDQ14103 355 aaKnown RBP9.83□□□□□ -0.84
SCAF11-205ENST00000465950 ACOX1Q15067 660 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 CCDC6Q16204 474 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 ALG11Q2TAA5 492 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 GLRA4Q5JXX5 417 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 PKN3Q6P5Z2 889 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 CCDC62Q6P9F0 684 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 TMEM145Q8NBT3 493 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 C7orf25Q9BPX7 421 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 C11orf70Q9BRQ4 267 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 BCAS3Q9H6U6 928 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 PDGFCQ9NRA1 345 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 AFF4Q9UHB7 1163 aaKnown RBP9.83□□□□□ -0.84
SCAF11-205ENST00000465950 ZNF112Q9UJU3 913 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 TLDC2A0PJX2 215 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 C9J4A7 227 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 H3BMM5 538 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 RAMP2O60895 175 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 KRT38O76015 456 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 CDH6P55285 790 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 FOXR1Q6PIV2 292 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 KCNT2Q6UVM3 1135 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 IL27RAQ6UWB1 636 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 TRIM67Q6ZTA4 783 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 LINC00301Q8NCQ3 95 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 PORCNQ9H237 461 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 OSGEPL1Q9H4B0 414 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 HHATLQ9HCP6 504 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 ATP13A1Q9HD20 1204 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 LATS2Q9NRM7 1088 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 HCN3Q9P1Z3 774 aa9.83□□□□□ -0.84
SCAF11-205ENST00000465950 MLH1P40692 756 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 MRNIPQ6NTE8 343 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 STOX1Q6ZVD7 989 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 ZNF771Q7L3S4 317 aaPredicted RBP9.82□□□□□ -0.84
SCAF11-205ENST00000465950 CERS5Q8N5B7 392 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.82□□□□□ -0.84
SCAF11-205ENST00000465950 NDOR1Q9UHB4 597 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 ANAPC7Q9UJX3 599 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 PHF24Q9UPV7 400 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 APOBEC2Q9Y235 224 aaKnown RBP9.82□□□□□ -0.84
SCAF11-205ENST00000465950 IQANK1A0A1B0GTG1 560 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 CES2O00748 559 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 ZNF217O75362 1048 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 KRT37O76014 449 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 MPOP05164 745 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 PAEPP09466 180 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 JAK1P23458 1154 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 NDUFA9Q16795 377 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 CLEC10AQ8IUN9 316 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 RNF217Q8TC41 542 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 MTBPQ96DY7 904 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 CPB2Q96IY4 423 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 TRAIPQ9BWF2 469 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 DDX4Q9NQI0 724 aaKnown RBP9.82□□□□□ -0.84
SCAF11-205ENST00000465950 RCOR1Q9UKL0 485 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 FGF10O15520 208 aaPredicted RBP9.82□□□□□ -0.84
SCAF11-205ENST00000465950 TTC4O95801 387 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 SERPIND1P05546 499 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 FAM163BP0C2L3 166 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 ABL2P42684 1182 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 MSH2P43246 934 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 NPTX2P47972 431 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 TAS2R50P59544 299 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 ILF3Q12906 894 aaKnown RBP eCLIP9.82□□□□□ -0.84
SCAF11-205ENST00000465950 RCOR2Q8IZ40 523 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 SETD7Q8WTS6 366 aaKnown RBP9.82□□□□□ -0.84
SCAF11-205ENST00000465950 SARS2Q9NP81 518 aaKnown RBP9.82□□□□□ -0.84
SCAF11-205ENST00000465950 CNTNAP5Q8WYK1 1306 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 TBC1D3DA0A087WVF3 549 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 TBC1D3IA0A087WXS9 549 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 TBC1D3EA0A087X179 549 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 TBC1D3KA0A087X1G2 549 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 A0A1W2PPC1 479 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 TBC1D3FA6NER0 549 aaPredicted RBP9.82□□□□□ -0.84
SCAF11-205ENST00000465950 TBC1D3LB9A6J9 549 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 KCNK3O14649 394 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 IGHEP01854 428 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 TBC1D3HP0C7X1 549 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 GUCY1A2P33402 732 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 PTGER2P43116 358 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 LYPLAL1Q5VWZ2 237 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 TBC1D3GQ6DHY5 549 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 TBC1D3CQ6IPX1 549 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 C3orf67Q6ZVT6 689 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 TBC1D3Q8IZP1 549 aaPredicted RBP9.82□□□□□ -0.84
SCAF11-205ENST00000465950 FAM49BQ9NUQ9 324 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 TBC1D13Q9NVG8 400 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 DRG1Q9Y295 367 aaKnown RBP9.82□□□□□ -0.84
SCAF11-205ENST00000465950 FHOD1Q9Y613 1164 aa9.82□□□□□ -0.84
SCAF11-205ENST00000465950 PEX12O00623 359 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 FPGTO14772 594 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 PDK2Q15119 407 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 ITPRIPL2Q3MIP1 535 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 MMS22LQ6ZRQ5 1243 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms