RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 USP3Q9Y6I4 520 aa27.35■■□□□ 1.97
SMC4-206ENST00000465903 MFAP3P55082 362 aa27.34■■□□□ 1.97
SMC4-206ENST00000465903 PDE4CQ08493 712 aa27.34■■□□□ 1.97
SMC4-206ENST00000465903 ANO6Q4KMQ2 910 aa27.34■■□□□ 1.97
SMC4-206ENST00000465903 ARHGAP29Q52LW3 1261 aa27.34■■□□□ 1.97
SMC4-206ENST00000465903 LCLAT1Q6UWP7 414 aa27.34■■□□□ 1.97
SMC4-206ENST00000465903 FLCNQ8NFG4 579 aa27.34■■□□□ 1.97
SMC4-206ENST00000465903 UBA3Q8TBC4 463 aa27.34■■□□□ 1.97
SMC4-206ENST00000465903 ARHGAP26Q9UNA1 814 aa27.34■■□□□ 1.97
SMC4-206ENST00000465903 BECN2A8MW95 431 aa27.33■■□□□ 1.97
SMC4-206ENST00000465903 TCF3P15923 654 aa27.33■■□□□ 1.97
SMC4-206ENST00000465903 BRD2P25440 801 aaKnown RBP27.33■■□□□ 1.97
SMC4-206ENST00000465903 AVPR2P30518 371 aa27.33■■□□□ 1.97
SMC4-206ENST00000465903 PDE6CP51160 858 aa27.33■■□□□ 1.97
SMC4-206ENST00000465903 SLC7A9P82251 487 aa27.33■■□□□ 1.97
SMC4-206ENST00000465903 PRKCQQ04759 706 aa27.33■■□□□ 1.97
SMC4-206ENST00000465903 ZNF77Q15935 545 aa27.33■■□□□ 1.97
SMC4-206ENST00000465903 CNGA2Q16280 664 aa27.33■■□□□ 1.97
SMC4-206ENST00000465903 ARHGAP44Q17R89 818 aa27.33■■□□□ 1.97
SMC4-206ENST00000465903 RAB41Q5JT25 222 aa27.33■■□□□ 1.97
SMC4-206ENST00000465903 SUGP1Q8IWZ8 645 aaKnown RBP27.33■■□□□ 1.97
SMC4-206ENST00000465903 FAM81BQ96LP2 452 aa27.33■■□□□ 1.97
SMC4-206ENST00000465903 FAM83CQ9BQN1 747 aa27.33■■□□□ 1.97
SMC4-206ENST00000465903 DDX23Q9BUQ8 820 aaKnown RBP27.33■■□□□ 1.97
SMC4-206ENST00000465903 VPS16Q9H269 839 aa27.33■■□□□ 1.97
SMC4-206ENST00000465903 TBC1D17Q9HA65 648 aa27.33■■□□□ 1.97
SMC4-206ENST00000465903 XPO1O14980 1071 aaKnown RBP27.32■■□□□ 1.96
SMC4-206ENST00000465903 PI15O43692 258 aa27.32■■□□□ 1.96
SMC4-206ENST00000465903 KRT5P13647 590 aa27.32■■□□□ 1.96
SMC4-206ENST00000465903 ZNF18P17022 549 aa27.32■■□□□ 1.96
SMC4-206ENST00000465903 COL9A1P20849 921 aa27.32■■□□□ 1.96
SMC4-206ENST00000465903 CLCN5P51795 746 aa27.32■■□□□ 1.96
SMC4-206ENST00000465903 BCAT1P54687 386 aa27.32■■□□□ 1.96
SMC4-206ENST00000465903 USP4Q13107 963 aa27.32■■□□□ 1.96
SMC4-206ENST00000465903 ASTLQ6HA08 431 aaPredicted RBP27.32■■□□□ 1.96
SMC4-206ENST00000465903 TMEM105Q8N8V8 129 aa27.32■■□□□ 1.96
SMC4-206ENST00000465903 CCSER2Q9H7U1 834 aa27.32■■□□□ 1.96
SMC4-206ENST00000465903 NMUR1Q9HB89 426 aa27.32■■□□□ 1.96
SMC4-206ENST00000465903 GKN1Q9NS71 199 aa27.32■■□□□ 1.96
SMC4-206ENST00000465903 OSER1Q9NX31 292 aa27.32■■□□□ 1.96
SMC4-206ENST00000465903 HESX1Q9UBX0 185 aa27.32■■□□□ 1.96
SMC4-206ENST00000465903 RAPGEFL1Q9UHV5 662 aa27.32■■□□□ 1.96
SMC4-206ENST00000465903 DNAJC12Q9UKB3 198 aa27.32■■□□□ 1.96
SMC4-206ENST00000465903 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.32■■□□□ 1.96
SMC4-206ENST00000465903 CYP26A1O43174 497 aa27.31■■□□□ 1.96
SMC4-206ENST00000465903 PTMSP20962 102 aa27.31■■□□□ 1.96
SMC4-206ENST00000465903 BST2Q10589 180 aaKnown RBP27.31■■□□□ 1.96
SMC4-206ENST00000465903 HECTD3Q5T447 861 aa27.31■■□□□ 1.96
SMC4-206ENST00000465903 AOPEPQ8N6M6 819 aa27.31■■□□□ 1.96
SMC4-206ENST00000465903 SH3RF2Q8TEC5 729 aa27.31■■□□□ 1.96
SMC4-206ENST00000465903 SHC3Q92529 594 aa27.31■■□□□ 1.96
SMC4-206ENST00000465903 SHDQ96IW2 340 aa27.31■■□□□ 1.96
SMC4-206ENST00000465903 BPIFA3Q9BQP9 254 aa27.31■■□□□ 1.96
SMC4-206ENST00000465903 TLR8Q9NR97 1041 aaKnown RBP27.31■■□□□ 1.96
SMC4-206ENST00000465903 LIMA1Q9UHB6 759 aaKnown RBP27.31■■□□□ 1.96
SMC4-206ENST00000465903 MYOFQ9NZM1 2061 aa27.31■■□□□ 1.96
SMC4-206ENST00000465903 PES1O00541 588 aaKnown RBP27.3■■□□□ 1.96
SMC4-206ENST00000465903 COCHO43405 550 aa27.3■■□□□ 1.96
SMC4-206ENST00000465903 AOC1P19801 751 aa27.3■■□□□ 1.96
SMC4-206ENST00000465903 TUBP50607 506 aa27.3■■□□□ 1.96
SMC4-206ENST00000465903 MTF1Q14872 753 aa27.3■■□□□ 1.96
SMC4-206ENST00000465903 TPRG1Q6ZUI0 275 aa27.3■■□□□ 1.96
SMC4-206ENST00000465903 SCD5Q86SK9 330 aa27.3■■□□□ 1.96
SMC4-206ENST00000465903 ACP6Q9NPH0 428 aa27.3■■□□□ 1.96
SMC4-206ENST00000465903 THG1LQ9NWX6 298 aaKnown RBP27.3■■□□□ 1.96
SMC4-206ENST00000465903 GTSE1Q9NYZ3 720 aa27.3■■□□□ 1.96
SMC4-206ENST00000465903 CPQQ9Y646 472 aa27.3■■□□□ 1.96
SMC4-206ENST00000465903 LEFTY2O00292 366 aa27.29■■□□□ 1.96
SMC4-206ENST00000465903 LETM1O95202 739 aaPredicted RBP27.29■■□□□ 1.96
SMC4-206ENST00000465903 MBL2P11226 248 aaPredicted RBP27.29■■□□□ 1.96
SMC4-206ENST00000465903 CD72P21854 359 aa27.29■■□□□ 1.96
SMC4-206ENST00000465903 PLA2G4AP47712 749 aa27.29■■□□□ 1.96
SMC4-206ENST00000465903 COPB1P53618 953 aaKnown RBP27.29■■□□□ 1.96
SMC4-206ENST00000465903 SLC8A3P57103 927 aa27.29■■□□□ 1.96
SMC4-206ENST00000465903 PLCB2Q00722 1185 aa27.29■■□□□ 1.96
SMC4-206ENST00000465903 TNK2Q07912 1038 aa27.29■■□□□ 1.96
SMC4-206ENST00000465903 STILQ15468 1287 aa27.29■■□□□ 1.96
SMC4-206ENST00000465903 KLHDC7AQ5VTJ3 777 aa27.29■■□□□ 1.96
SMC4-206ENST00000465903 APTXQ7Z2E3 356 aaKnown RBP27.29■■□□□ 1.96
SMC4-206ENST00000465903 CCDC186Q7Z3E2 898 aa27.29■■□□□ 1.96
SMC4-206ENST00000465903 DHX40Q8IX18 779 aaKnown RBP27.29■■□□□ 1.96
SMC4-206ENST00000465903 CSGALNACT1Q8TDX6 532 aa27.29■■□□□ 1.96
SMC4-206ENST00000465903 SLC35F5Q8WV83 523 aa27.29■■□□□ 1.96
SMC4-206ENST00000465903 ZFRQ96KR1 1074 aaKnown RBP27.29■■□□□ 1.96
SMC4-206ENST00000465903 FOXQ1Q9C009 403 aa27.29■■□□□ 1.96
SMC4-206ENST00000465903 HPS4Q9NQG7 708 aa27.29■■□□□ 1.96
SMC4-206ENST00000465903 A0A1W2PQH9 124 aa27.28■■□□□ 1.96
SMC4-206ENST00000465903 KANSL1LA0AUZ9 987 aa27.28■■□□□ 1.96
SMC4-206ENST00000465903 SYCE3A1L190 88 aa27.28■■□□□ 1.96
SMC4-206ENST00000465903 LRRC10BA6NIK2 292 aa27.28■■□□□ 1.96
SMC4-206ENST00000465903 STK25O00506 426 aa27.28■■□□□ 1.96
SMC4-206ENST00000465903 GABBR2O75899 941 aa27.28■■□□□ 1.96
SMC4-206ENST00000465903 SETSIPP0DME0 302 aa27.28■■□□□ 1.96
SMC4-206ENST00000465903 TRIM68Q6AZZ1 485 aa27.28■■□□□ 1.96
SMC4-206ENST00000465903 ZNF606Q8WXB4 792 aa27.28■■□□□ 1.96
SMC4-206ENST00000465903 KCTD13Q8WZ19 329 aa27.28■■□□□ 1.96
SMC4-206ENST00000465903 SECISBP2LQ93073 1101 aaKnown RBP27.28■■□□□ 1.96
SMC4-206ENST00000465903 NAT10Q9H0A0 1025 aaKnown RBP27.28■■□□□ 1.96
SMC4-206ENST00000465903 CYLDQ9NQC7 956 aa27.28■■□□□ 1.96
SMC4-206ENST00000465903 SMPD4Q9NXE4 827 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms