RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ZNF394Q53GI3 561 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 TMEM196Q5HYL7 178 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 DGKKQ5KSL6 1271 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 KLHL10Q6JEL2 608 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 TTI2Q6NXR4 508 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 PKN3Q6P5Z2 889 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 ZC3H14Q6PJT7 736 aaKnown RBP23.06■■□□□ 1.28
LIME1-203ENST00000465591 CLEC20AQ6ZU45 233 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 ZBTB44Q8NCP5 570 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 CCDC150Q8NCX0 1101 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 SLC35C1Q96A29 364 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 CYFIP2Q96F07 1278 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 IER2Q9BTL4 223 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 GTPBP4Q9BZE4 634 aaKnown RBP23.06■■□□□ 1.28
LIME1-203ENST00000465591 COQ4Q9Y3A0 265 aa23.06■■□□□ 1.28
LIME1-203ENST00000465591 ZNF292O60281 2723 aa23.05■■□□□ 1.28
LIME1-203ENST00000465591 TRDMT1O14717 391 aaKnown RBP23.05■■□□□ 1.28
LIME1-203ENST00000465591 COCHO43405 550 aa23.05■■□□□ 1.28
LIME1-203ENST00000465591 STX10O60499 249 aa23.05■■□□□ 1.28
LIME1-203ENST00000465591 LMNAP02545 664 aaKnown RBP23.05■■□□□ 1.28
LIME1-203ENST00000465591 ZDHHC11BP0C7U3 371 aa23.05■■□□□ 1.28
LIME1-203ENST00000465591 FAM200BP0CF97 657 aa23.05■■□□□ 1.28
LIME1-203ENST00000465591 SPEM1Q8N4L4 309 aa23.05■■□□□ 1.28
LIME1-203ENST00000465591 CPA6Q8N4T0 437 aa23.05■■□□□ 1.28
LIME1-203ENST00000465591 PDZD8Q8NEN9 1154 aa23.05■■□□□ 1.28
LIME1-203ENST00000465591 OVCA2Q8WZ82 227 aa23.05■■□□□ 1.28
LIME1-203ENST00000465591 JAKMIP2Q96AA8 810 aa23.05■■□□□ 1.28
LIME1-203ENST00000465591 ZFRQ96KR1 1074 aaKnown RBP23.05■■□□□ 1.28
LIME1-203ENST00000465591 SEMA4AQ9H3S1 761 aa23.05■■□□□ 1.28
LIME1-203ENST00000465591 CCSER2Q9H7U1 834 aa23.05■■□□□ 1.28
LIME1-203ENST00000465591 CISHQ9NSE2 258 aa23.05■■□□□ 1.28
LIME1-203ENST00000465591 ZSCAN32Q9NX65 697 aa23.05■■□□□ 1.28
LIME1-203ENST00000465591 ARMCX3Q9UH62 379 aaPredicted RBP23.05■■□□□ 1.28
LIME1-203ENST00000465591 SPTBN4Q9H254 2564 aa23.04■■□□□ 1.28
LIME1-203ENST00000465591 KIAA1549LQ6ZVL6 1849 aa23.04■■□□□ 1.28
LIME1-203ENST00000465591 MBL2P11226 248 aaPredicted RBP23.04■■□□□ 1.28
LIME1-203ENST00000465591 GALK1P51570 392 aa23.04■■□□□ 1.28
LIME1-203ENST00000465591 CCR3P51677 355 aa23.04■■□□□ 1.28
LIME1-203ENST00000465591 DMWDQ09019 674 aa23.04■■□□□ 1.28
LIME1-203ENST00000465591 STIM1Q13586 685 aa23.04■■□□□ 1.28
LIME1-203ENST00000465591 PPP1R26Q5T8A7 1209 aaPredicted RBP23.04■■□□□ 1.28
LIME1-203ENST00000465591 SNX30Q5VWJ9 437 aa23.04■■□□□ 1.28
LIME1-203ENST00000465591 SUMF1Q8NBK3 374 aa23.04■■□□□ 1.28
LIME1-203ENST00000465591 NELFBQ8WX92 580 aa23.04■■□□□ 1.28
LIME1-203ENST00000465591 EZH1Q92800 747 aaPredicted RBP23.04■■□□□ 1.28
LIME1-203ENST00000465591 ATP2A3Q93084 1043 aa23.04■■□□□ 1.28
LIME1-203ENST00000465591 COMMD8Q9NX08 183 aa23.04■■□□□ 1.28
LIME1-203ENST00000465591 PCDHGA2Q9Y5H1 932 aa23.04■■□□□ 1.28
LIME1-203ENST00000465591 LILRB5O75023 590 aa23.03■■□□□ 1.28
LIME1-203ENST00000465591 EGFP01133 1207 aa23.03■■□□□ 1.28
LIME1-203ENST00000465591 CXCL12P48061 93 aa23.03■■□□□ 1.28
LIME1-203ENST00000465591 RAD23BP54727 409 aa23.03■■□□□ 1.28
LIME1-203ENST00000465591 GAB4Q2WGN9 574 aa23.03■■□□□ 1.28
LIME1-203ENST00000465591 FILIP1Q7Z7B0 1213 aa23.03■■□□□ 1.28
LIME1-203ENST00000465591 SLC4A11Q8NBS3 891 aa23.03■■□□□ 1.28
LIME1-203ENST00000465591 WBP2Q969T9 261 aa23.03■■□□□ 1.28
LIME1-203ENST00000465591 FAXDC2Q96IV6 333 aa23.03■■□□□ 1.28
LIME1-203ENST00000465591 CHMP5Q9NZZ3 219 aa23.03■■□□□ 1.28
LIME1-203ENST00000465591 CFAP97Q9P2B7 532 aa23.03■■□□□ 1.28
LIME1-203ENST00000465591 CTNND2Q9UQB3 1225 aa23.03■■□□□ 1.28
LIME1-203ENST00000465591 K7ESF4 209 aa23.02■■□□□ 1.28
LIME1-203ENST00000465591 STX17P56962 302 aa23.02■■□□□ 1.28
LIME1-203ENST00000465591 HECTD3Q5T447 861 aa23.02■■□□□ 1.28
LIME1-203ENST00000465591 CEP63Q96MT8 703 aa23.02■■□□□ 1.28
LIME1-203ENST00000465591 P2RY13Q9BPV8 354 aa23.02■■□□□ 1.28
LIME1-203ENST00000465591 OSER1Q9NX31 292 aa23.02■■□□□ 1.28
LIME1-203ENST00000465591 CYP26A1O43174 497 aa23.01■■□□□ 1.27
LIME1-203ENST00000465591 FMO5P49326 533 aa23.01■■□□□ 1.27
LIME1-203ENST00000465591 GRSF1Q12849 480 aaKnown RBP eCLIP23.01■■□□□ 1.276e-6■■■■□ 20.5
LIME1-203ENST00000465591 SYNPOQ8N3V7 929 aa23.01■■□□□ 1.27
LIME1-203ENST00000465591 ATRIPQ8WXE1 791 aa23.01■■□□□ 1.27
LIME1-203ENST00000465591 HEXIM2Q96MH2 286 aaKnown RBP23.01■■□□□ 1.27
LIME1-203ENST00000465591 NMUR1Q9HB89 426 aa23.01■■□□□ 1.27
LIME1-203ENST00000465591 POLR3BQ9NW08 1133 aaPredicted RBP23.01■■□□□ 1.27
LIME1-203ENST00000465591 PAPSS2O95340 614 aaPredicted RBP23■■□□□ 1.27
LIME1-203ENST00000465591 TBX18O95935 607 aa23■■□□□ 1.27
LIME1-203ENST00000465591 CYP17A1P05093 508 aa23■■□□□ 1.27
LIME1-203ENST00000465591 ACO1P21399 889 aaKnown RBP23■■□□□ 1.27
LIME1-203ENST00000465591 PPP1R2P41236 205 aa23■■□□□ 1.27
LIME1-203ENST00000465591 TUBP50607 506 aa23■■□□□ 1.27
LIME1-203ENST00000465591 UBE2HP62256 183 aa23■■□□□ 1.27
LIME1-203ENST00000465591 LRMPQ12912 555 aa23■■□□□ 1.27
LIME1-203ENST00000465591 CUL2Q13617 745 aa23■■□□□ 1.27
LIME1-203ENST00000465591 CAMK4Q16566 473 aa23■■□□□ 1.27
LIME1-203ENST00000465591 ADGRG2Q8IZP9 1017 aa23■■□□□ 1.27
LIME1-203ENST00000465591 TMEM176AQ96HP8 235 aa23■■□□□ 1.27
LIME1-203ENST00000465591 DUSP16Q9BY84 665 aa23■■□□□ 1.27
LIME1-203ENST00000465591 FAM126AQ9BYI3 521 aaPredicted RBP23■■□□□ 1.27
LIME1-203ENST00000465591 FBXO44Q9H4M3 255 aa23■■□□□ 1.27
LIME1-203ENST00000465591 METTL14Q9HCE5 456 aaKnown RBP23■■□□□ 1.27
LIME1-203ENST00000465591 SCML2Q9UQR0 700 aa23■■□□□ 1.27
LIME1-203ENST00000465591 ANTXRLA6NF34 631 aa22.99■■□□□ 1.27
LIME1-203ENST00000465591 RNF40O75150 1001 aa22.99■■□□□ 1.27
LIME1-203ENST00000465591 NFATC1O95644 943 aa22.99■■□□□ 1.27
LIME1-203ENST00000465591 TRIM21P19474 475 aaKnown RBP22.99■■□□□ 1.27
LIME1-203ENST00000465591 OPRD1P41143 372 aa22.99■■□□□ 1.27
LIME1-203ENST00000465591 AMPD2Q01433 879 aa22.99■■□□□ 1.27
LIME1-203ENST00000465591 CCDC40Q4G0X9 1142 aa22.99■■□□□ 1.27
LIME1-203ENST00000465591 FOXR2Q6PJQ5 311 aa22.99■■□□□ 1.27
LIME1-203ENST00000465591 UBR7Q8N806 425 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms