RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 RPL34P49207 117 aaKnown RBP17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 NAP1L1P55209 391 aaKnown RBP17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 DUSP6Q16828 381 aa17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 SDHAF4Q5VUM1 108 aa17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 CREG2Q8IUH2 290 aa17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 HSFY1Q96LI6 401 aa17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 FAM161BQ96MY7 647 aa17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 CPXM1Q96SM3 734 aa17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 SLC4A5Q9BY07 1137 aa17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 ISCUQ9H1K1 167 aa17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 ANKZF1Q9H8Y5 726 aa17.81■□□□□ 0.44
EXOSC3-203ENST00000465229 NCANO14594 1321 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 CES2O00748 559 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 TRIM66O15016 1216 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 SRGAP2O75044 1071 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 RTN2O75298 545 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 PALMO75781 387 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 FTLP02792 175 aaPredicted RBP17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 TMEM253P0C7T8 217 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 ATF6P18850 670 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 MMP8P22894 467 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 NSFP46459 744 aaKnown RBP17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 RPL10AP62906 217 aaKnown RBP17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 ADGRE1Q14246 886 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 PTPN20Q4JDL3 420 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 MEI1Q5TIA1 1274 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 TMCO3Q6UWJ1 677 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 TMEM110Q86TL2 294 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 ERICH1Q86X53 443 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 PHF13Q86YI8 300 aaPredicted RBP17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 GPR152Q8TDT2 470 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 KCTD13Q8WZ19 329 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 NSUN3Q9H649 340 aaKnown RBP17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 PNPLA8Q9NP80 782 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 ST7Q9NRC1 585 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 TJP2Q9UDY2 1190 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 YIPF1Q9Y548 306 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 HCFC2Q9Y5Z7 792 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 PTPRDP23468 1912 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 GRID2IPA4D2P6 1211 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 TNFRSF10BO14763 440 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 POU3F3P20264 500 aaPredicted RBP17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 PTP4A2Q12974 167 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 C2CD6Q53TS8 623 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 HABP4Q5JVS0 413 aaKnown RBP17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 GPRIN1Q7Z2K8 1008 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 SLC7A14Q8TBB6 771 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 HNRNPLLQ8WVV9 542 aaKnown RBP17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 SPATA17Q96L03 361 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 PLEKHA4Q9H4M7 779 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 INSL5Q9Y5Q6 135 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 MTCH2Q9Y6C9 303 aa17.8■□□□□ 0.44
EXOSC3-203ENST00000465229 PIK3R2O00459 728 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 ZRANB2O95218 330 aaKnown RBP eCLIP17.79■□□□□ 0.441e-7■□□□□ 10.3
EXOSC3-203ENST00000465229 C8AP07357 584 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 ALDH1A3P47895 512 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 TCEAL1Q15170 157 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 TCEAL5Q5H9L2 206 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 RAB41Q5JT25 222 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 MMS22LQ6ZRQ5 1243 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 CCDC149Q6ZUS6 474 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 MON1BQ7L1V2 547 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 SLFN11Q7Z7L1 901 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 MCOLN2Q8IZK6 566 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 LRRC57Q8N9N7 239 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 NOA1Q8NC60 698 aaKnown RBP17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 STKLD1Q8NE28 680 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 GIPC2Q8TF65 315 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 UBE2Q2Q8WVN8 375 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 PPP2R3CQ969Q6 453 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 CDCA3Q99618 268 aaPredicted RBP17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 CYLDQ9NQC7 956 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 ADAM22Q9P0K1 906 aa17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 COL4A4P53420 1690 aaPredicted RBP17.79■□□□□ 0.44
EXOSC3-203ENST00000465229 REV3LO60673 3130 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 TARSL2A2RTX5 802 aaKnown RBP17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 E5RJQ4 531 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 ERBB2P04626 1255 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 MCM3P25205 808 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 GABRB2P47870 512 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 SLC5A3P53794 718 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 GALCP54803 685 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 TWF1Q12792 350 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 HYAL1Q12794 435 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 KCNC3Q14003 757 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 LIN9Q5TKA1 542 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 GPR153Q6NV75 609 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 PPP1R2P3Q6NXS1 205 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 LLGL2Q6P1M3 1020 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 WDR93Q6P2C0 686 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 SYCE1Q8N0S2 351 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 VN1R2Q8NFZ6 395 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 SCAMP5Q8TAC9 235 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 HDAC7Q8WUI4 952 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 C18orf8Q96DM3 657 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 CAPZA3Q96KX2 299 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 C11orf70Q9BRQ4 267 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 IGFLR1Q9H665 355 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 LRRC4Q9HBW1 653 aa17.78■□□□□ 0.44
EXOSC3-203ENST00000465229 MAN1C1Q9NR34 630 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms