RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TTC1Q99614 292 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 CGRRF1Q99675 332 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 UBE2OQ9C0C9 1292 aaKnown RBP7.6□□□□□ -1.19
USP48-206ENST00000464577 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.6□□□□□ -1.19
USP48-206ENST00000464577 IRAK4Q9NWZ3 460 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 MAP3K20Q9NYL2 800 aaKnown RBP7.6□□□□□ -1.19
USP48-206ENST00000464577 TCEAL9Q9UHQ7 104 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 TTLL3Q9Y4R7 772 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 THSD7AQ9UPZ6 1657 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 ANKRD31Q8N7Z5 1873 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 ARID2Q68CP9 1835 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 PTPRJQ12913 1337 aa7.6□□□□□ -1.19
USP48-206ENST00000464577 SDR42E2A6NKP2 422 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 TRIM49D1C9J1S8 452 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 APOC4-APOC2K7ER74 178 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 TRDMT1O14717 391 aaKnown RBP7.59□□□□□ -1.19
USP48-206ENST00000464577 CASQ2O14958 399 aaPredicted RBP7.59□□□□□ -1.19
USP48-206ENST00000464577 CHADO15335 359 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 PEX1O43933 1283 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 DKC1O60832 514 aaKnown RBP eCLIP7.59□□□□□ -1.19
USP48-206ENST00000464577 PIAS1O75925 651 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 USP1O94782 785 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 PIGRP01833 764 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 APOC2P02655 101 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 WEE2P0C1S8 567 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 KDELR1P24390 212 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 PRKCHP24723 683 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 PTGER2P43116 358 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 LIG4P49917 911 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 AQP5P55064 265 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 YWHAGP61981 247 aaKnown RBP eCLIP7.59□□□□□ -1.19
USP48-206ENST00000464577 IRX4P78413 519 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 KDSRQ06136 332 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 BTKQ06187 659 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 MED21Q13503 144 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 DPYSL3Q14195 570 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 MAP7Q14244 749 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 HADHQ16836 314 aaKnown RBP7.59□□□□□ -1.19
USP48-206ENST00000464577 LMBRD2Q68DH5 695 aaPredicted RBP7.59□□□□□ -1.19
USP48-206ENST00000464577 CDHR3Q6ZTQ4 885 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 RFX8Q6ZV50 586 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 RASSF3Q86WH2 238 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 IGDCC3Q8IVU1 814 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 UNC45BQ8IWX7 931 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 CLEC4DQ8WXI8 215 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 ACSF2Q96CM8 615 aaPredicted RBP7.59□□□□□ -1.19
USP48-206ENST00000464577 CLPTM1LQ96KA5 538 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 BTBD9Q96Q07 612 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 CSRNP1Q96S65 589 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 KLHL4Q9C0H6 718 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 PDLIM7Q9NR12 457 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 ITGA11Q9UKX5 1188 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 CCPG1Q9ULG6 757 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 NUB1Q9Y5A7 615 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 SIP14410 1827 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 PRR5-ARHGAP8B1AHC4 643 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 BTBD19C9JJ37 291 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 MCF2LO15068 1137 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 STAM2O75886 525 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 DGAT1O75907 488 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 KLHL2O95198 593 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 BPGMP07738 259 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 HARSP12081 509 aaKnown RBP7.59□□□□□ -1.19
USP48-206ENST00000464577 VAV1P15498 845 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 NPR1P16066 1061 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 EIF4BP23588 611 aaKnown RBP7.59□□□□□ -1.19
USP48-206ENST00000464577 PSMA2P25787 234 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 SSTR3P32745 418 aaPredicted RBP7.59□□□□□ -1.19
USP48-206ENST00000464577 WNT7BP56706 349 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 NLRP11P59045 1033 aaKnown RBP7.59□□□□□ -1.19
USP48-206ENST00000464577 EIF3EP60228 445 aaKnown RBP7.59□□□□□ -1.19
USP48-206ENST00000464577 DYNLT1P63172 113 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 BASP1P80723 227 aaKnown RBP7.59□□□□□ -1.19
USP48-206ENST00000464577 MRPS5P82675 430 aaKnown RBP7.59□□□□□ -1.19
USP48-206ENST00000464577 ARHGAP8P85298 464 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 PDE1BQ01064 536 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 MSLNQ13421 630 aaPredicted RBP7.59□□□□□ -1.19
USP48-206ENST00000464577 CHI3L2Q15782 390 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 ANKRD20A4Q4UJ75 823 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 CFAP157Q5JU67 520 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 RABGAP1LQ5R372 815 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 CC2D2BQ6DHV5 1058 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 DPY19L2Q6NUT2 758 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 NCAPG2Q86XI2 1143 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 NUDCD3Q8IVD9 361 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 LZICQ8WZA0 190 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 CEP170P1Q96L14 293 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 ZCWPW1Q9H0M4 648 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 DHX33Q9H6R0 707 aaKnown RBP7.59□□□□□ -1.19
USP48-206ENST00000464577 PTTG2Q9NZH5 202 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 AGO2Q9UKV8 859 aaKnown RBP7.59□□□□□ -1.19
USP48-206ENST00000464577 PCDHGC3Q9UN70 934 aa7.59□□□□□ -1.19
USP48-206ENST00000464577 A0A0B4J269 797 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 NFIBO00712 420 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 OPHN1O60890 802 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 LRCH4O75427 683 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 RFPL1O75677 317 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 STBD1O95210 358 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 LDHAP00338 332 aaKnown RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 PYGLP06737 847 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms