RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 CLCN1P35523 988 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 PLA2G4AP47712 749 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 PDE6CP51160 858 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 BPIFB4P59827 614 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 RAB41Q5JT25 222 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 SNX30Q5VWJ9 437 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 VITQ6UXI7 678 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 ARL14EPQ8N8R7 260 aaPredicted RBP15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 NEK11Q8NG66 645 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 NUP210Q8TEM1 1887 aaPredicted RBP15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 SLC35F5Q8WV83 523 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 SECISBP2LQ93073 1101 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 NAP1L5Q96NT1 182 aaPredicted RBP15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 SLC22A12Q96S37 553 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 SMG9Q9H0W8 520 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 TLR8Q9NR97 1041 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 GMIPQ9P107 970 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 DAAM1Q9Y4D1 1078 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 USP3Q9Y6I4 520 aa15.3■□□□□ 0.04
SQSTM1-205ENST00000464493 A0A1B0GTH6 734 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 EPHB6O15197 1021 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 PRAMEF12O95522 483 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 CKMP06732 381 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 SRFP11831 508 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 PSMC3P17980 439 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 GPC5P78333 572 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 FANCCQ00597 558 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 NR1I3Q14994 352 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 MEA1Q16626 185 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 HECTD3Q5T447 861 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 SLC47A2Q86VL8 602 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 MFSD6LQ8IWD5 586 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 CELF5Q8N6W0 485 aaKnown RBP15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 KCTD13Q8WZ19 329 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 USP13Q92995 863 aaPredicted RBP15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 RSPRY1Q96DX4 576 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 TRMT61BQ9BVS5 477 aaKnown RBP15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 LRRC4Q9HBW1 653 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 NLRC4Q9NPP4 1024 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 TDP1Q9NUW8 608 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 OBP2AQ9NY56 170 aa15.29■□□□□ 0.04
SQSTM1-205ENST00000464493 F8VZ95 297 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 OAS1P00973 400 aaKnown RBP15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 GPD2P43304 727 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 TKTL1P51854 596 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 ZNF445P59923 1031 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 SIGLEC14Q08ET2 396 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 GRM2Q14416 872 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 ZNF268Q14587 947 aaPredicted RBP15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 PMF1Q6P1K2 205 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 DENND1BQ6P3S1 775 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 TRIM67Q6ZTA4 783 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 CCDC186Q7Z3E2 898 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 YAF2Q8IY57 180 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 DEPDC1BQ8WUY9 529 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 HSFY1Q96LI6 401 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 LRRC3BQ96PB8 259 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 RNF38Q9H0F5 515 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 SLC2A4RGQ9NR83 387 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 CCL26Q9Y258 94 aa15.28■□□□□ 0.04
SQSTM1-205ENST00000464493 MYO16Q9Y6X6 1858 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 A0A1W2PQC6 194 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 ZBED1O96006 694 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 CFHP08603 1231 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 LCP1P13796 627 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 KRT9P35527 623 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 PGFP49763 221 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 PSEN1P49768 467 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 RGS7P49802 495 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 TUBP50607 506 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 UBASH3AP57075 661 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 JAM2P57087 298 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 ADIGQ0VDE8 80 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 PM20D1Q6GTS8 502 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 SIX6OS1Q8N1H7 587 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 BPIFB1Q8TDL5 484 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 SPAG5Q96R06 1193 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 KIF9Q9HAQ2 790 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 PCDHGC3Q9UN70 934 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 ARHGAP26Q9UNA1 814 aa15.27■□□□□ 0.04
SQSTM1-205ENST00000464493 A0A1W2PQH9 124 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 ZNF263O14978 683 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 COCHO43405 550 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 TLR5O60602 858 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 GFPT2O94808 682 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 OLFM2O95897 454 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 CYP11B1P15538 503 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 GDI1P31150 447 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 SOX5P35711 763 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 STAT1P42224 750 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 SLC7A9P82251 487 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 PFKPQ01813 784 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 FCHO2Q0JRZ9 810 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 CACNA2D4Q7Z3S7 1137 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 SCD5Q86SK9 330 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 ARHGAP18Q8N392 663 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 RNF214Q8ND24 703 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 STK32AQ8WU08 396 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 IRF7Q92985 503 aa15.26■□□□□ 0.03
SQSTM1-205ENST00000464493 ULBP1Q9BZM6 244 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms