RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 TSPAN16Q9UKR8 245 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 KIAA1257Q9ULG3 409 aa17.98■□□□□ 0.47
VPS52-215ENST00000464425 OBSL1O75147 1896 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 FAM92AA1XBS5 289 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 PI15O43692 258 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 PAEPP09466 180 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 CD72P21854 359 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 PDE6CP51160 858 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 SLC8A3P57103 927 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 ZNF268Q14587 947 aaPredicted RBP17.97■□□□□ 0.47
VPS52-215ENST00000464425 ARHGAP44Q17R89 818 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 FILIP1LQ4L180 1135 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 SMYD5Q6GMV2 418 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 TPRG1Q6ZUI0 275 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 PIGZQ86VD9 579 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 TTC30AQ86WT1 665 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 GAS2L3Q86XJ1 694 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 TMEM105Q8N8V8 129 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 RNF214Q8ND24 703 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 CSGALNACT1Q8TDX6 532 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 OVCA2Q8WZ82 227 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 DNASE1L2Q92874 299 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 SHDQ96IW2 340 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 FOXQ1Q9C009 403 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 KIF9Q9HAQ2 790 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
VPS52-215ENST00000464425 GKN1Q9NS71 199 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 SMPD4Q9NXE4 827 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 APEX2Q9UBZ4 518 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 SCML2Q9UQR0 700 aa17.97■□□□□ 0.47
VPS52-215ENST00000464425 ZNF638Q14966 1978 aaKnown RBP17.97■□□□□ 0.47
VPS52-215ENST00000464425 A0A1B0GTH6 734 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 TULP2O00295 520 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 ARNTLO00327 626 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 O00370 1275 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 CYP26A1O43174 497 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 OAS1P00973 400 aaKnown RBP17.96■□□□□ 0.47
VPS52-215ENST00000464425 SERPINC1P01008 464 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 BRD2P25440 801 aaKnown RBP17.96■□□□□ 0.47
VPS52-215ENST00000464425 CLCN5P51795 746 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 KIF11P52732 1056 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 ZNF132P52740 706 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 MFAP3P55082 362 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 STARD6P59095 220 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 FANCCQ00597 558 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 PRKCQQ04759 706 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 TNK2Q07912 1038 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 PDE4CQ08493 712 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 KCNMA1Q12791 1236 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 ARHGAP29Q52LW3 1261 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 HECTD3Q5T447 861 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 CC2D1AQ6P1N0 951 aaPredicted RBP17.96■□□□□ 0.47
VPS52-215ENST00000464425 SH3RF2Q8TEC5 729 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 FAM81BQ96LP2 452 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 ZSWIM1Q9BR11 485 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 CCSER2Q9H7U1 834 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 PNPLA8Q9NP80 782 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 SIX2Q9NPC8 291 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 GTSE1Q9NYZ3 720 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 HESX1Q9UBX0 185 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 ARHGAP26Q9UNA1 814 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 ANAPC1Q9H1A4 1944 aa17.96■□□□□ 0.47
VPS52-215ENST00000464425 NUP210Q8TEM1 1887 aaPredicted RBP17.95■□□□□ 0.46
VPS52-215ENST00000464425 COCHO43405 550 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 ZDHHC11BP0C7U3 371 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 MBL2P11226 248 aaPredicted RBP17.95■□□□□ 0.46
VPS52-215ENST00000464425 PFKLP17858 780 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 USP8P40818 1118 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 ZXDBP98169 803 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 UBXN1Q04323 297 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 NR1I3Q14994 352 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 SNX30Q5VWJ9 437 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 TRIM68Q6AZZ1 485 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 ENOSF1Q7L5Y1 443 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 NAP1L5Q96NT1 182 aaPredicted RBP17.95■□□□□ 0.46
VPS52-215ENST00000464425 ERGIC2Q96RQ1 377 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 UBXN6Q9BZV1 441 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 RBSNQ9H1K0 784 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 TRPV5Q9NQA5 729 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 TLR8Q9NR97 1041 aaKnown RBP17.95■□□□□ 0.46
VPS52-215ENST00000464425 DNAJC12Q9UKB3 198 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 HCN4Q9Y3Q4 1203 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 CPQQ9Y646 472 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 PIAS3Q9Y6X2 628 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 COL4A3Q01955 1670 aa17.95■□□□□ 0.46
VPS52-215ENST00000464425 A0A1W2PQH9 124 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 KANSL1LA0AUZ9 987 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 LEFTY2O00292 366 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 XPO1O14980 1071 aaKnown RBP17.94■□□□□ 0.46
VPS52-215ENST00000464425 AOC1P19801 751 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 SOX9P48436 509 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 KPNA1P52294 538 aaPredicted RBP17.94■□□□□ 0.46
VPS52-215ENST00000464425 BCAT1P54687 386 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 SLC7A9P82251 487 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 PLCB2Q00722 1185 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 BST2Q10589 180 aaKnown RBP17.94■□□□□ 0.46
VPS52-215ENST00000464425 MTF1Q14872 753 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 ZNF77Q15935 545 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 CNGA2Q16280 664 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 DPY19L2P1Q6NXN4 242 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms