RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 TAAR9Q96RI9 348 aa5.09□□□□□ -1.59
ITGB1-208ENST00000464001 EFHD1Q9BUP0 239 aa5.09□□□□□ -1.59
ITGB1-208ENST00000464001 SMURF2Q9HAU4 748 aa5.09□□□□□ -1.59
ITGB1-208ENST00000464001 A1CFQ9NQ94 594 aaKnown RBP5.09□□□□□ -1.59
ITGB1-208ENST00000464001 ASIC5Q9NY37 505 aa5.09□□□□□ -1.59
ITGB1-208ENST00000464001 DRG1Q9Y295 367 aaKnown RBP5.09□□□□□ -1.59
ITGB1-208ENST00000464001 TMEM233B4DJY2 109 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 SOCS2O14508 198 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 RFPL1O75677 317 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 RNF8O76064 485 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 MT-CO3P00414 261 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 PDGFRBP09619 1106 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 SLC7A1P30825 629 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 MTHFSP49914 203 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 RAB27AP51159 221 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 PSG6Q00889 435 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 FHL1Q13642 323 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 NPNTQ6UXI9 565 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 C16orf52Q8NHV5 167 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 IL31RAQ8NI17 732 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 PPP1R9BQ96SB3 815 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 SNX15Q9NRS6 342 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 PI4KBQ9UBF8 816 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 AFG3L2Q9Y4W6 797 aa5.08□□□□□ -1.6
ITGB1-208ENST00000464001 MYMKA6NI61 221 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 TRIM38O00635 465 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 RGS10O43665 173 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 CTNND1O60716 968 aaKnown RBP5.07□□□□□ -1.6
ITGB1-208ENST00000464001 TUSC2O75896 110 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 PARNO95453 639 aaKnown RBP5.07□□□□□ -1.6
ITGB1-208ENST00000464001 NTN1O95631 604 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 MAP4K4O95819 1239 aaPredicted RBP5.07□□□□□ -1.6
ITGB1-208ENST00000464001 TMEM191BP0C7N4 346 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 HOXB6P17509 224 aaKnown RBP5.07□□□□□ -1.6
ITGB1-208ENST00000464001 COPB1P53618 953 aaKnown RBP5.07□□□□□ -1.6
ITGB1-208ENST00000464001 FOXG1P55316 489 aaPredicted RBP5.07□□□□□ -1.6
ITGB1-208ENST00000464001 IRX6P78412 446 aaPredicted RBP5.07□□□□□ -1.6
ITGB1-208ENST00000464001 LMAN2Q12907 356 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 LRRC41Q15345 812 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 ZNF260Q3ZCT1 412 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 DCAF12L1Q5VU92 463 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 TMEM65Q6PI78 240 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 SHC4Q6S5L8 630 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 MAEAQ7L5Y9 396 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 ZBTB34Q8NCN2 500 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 DNAJB14Q8TBM8 379 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 ZNF398Q8TD17 642 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 SPSB4Q96A44 273 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 COQ8BQ96D53 544 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 ZC3H10Q96K80 434 aaKnown RBP5.07□□□□□ -1.6
ITGB1-208ENST00000464001 WACQ9BTA9 647 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 RTFDC1Q9BY42 306 aaPredicted RBP5.07□□□□□ -1.6
ITGB1-208ENST00000464001 TRIM5Q9C035 493 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 DDX56Q9NY93 547 aaKnown RBP5.07□□□□□ -1.6
ITGB1-208ENST00000464001 CDY1Q9Y6F8 540 aa5.07□□□□□ -1.6
ITGB1-208ENST00000464001 CAPN8A6NHC0 703 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 SRGAP2O75044 1071 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 RASAL1O95294 804 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 U2AF1L5P0DN76 240 aaPredicted RBP5.06□□□□□ -1.6
ITGB1-208ENST00000464001 CREB1P16220 341 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 UQCRC1P31930 480 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 EPHB1P54762 984 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 KRTAP10-9P60411 292 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 U2AF1Q01081 240 aaKnown RBP eCLIP5.06□□□□□ -1.6
ITGB1-208ENST00000464001 CACHD1Q5VU97 1274 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 ZDHHC24Q6UX98 284 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 EPM2AIP1Q7L775 607 aaPredicted RBP5.06□□□□□ -1.6
ITGB1-208ENST00000464001 OSR1Q8TAX0 266 aaPredicted RBP5.06□□□□□ -1.6
ITGB1-208ENST00000464001 VN1R3Q9BXE9 311 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 B3GNT5Q9BYG0 378 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 CDH19Q9H159 772 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 MYH16Q9H6N6 1097 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 ATP6V0A4Q9HBG4 840 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 METTL14Q9HCE5 456 aaKnown RBP5.06□□□□□ -1.6
ITGB1-208ENST00000464001 TRIM36Q9NQ86 728 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 MGAT4CQ9UBM8 478 aa5.06□□□□□ -1.6
ITGB1-208ENST00000464001 LOC102723971A0A1B0GUV8 181 aa5.05□□□□□ -1.6
ITGB1-208ENST00000464001 MBD3L4A6NDZ8 208 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-208ENST00000464001 MBD3L3A6NE82 208 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-208ENST00000464001 INSIG1O15503 277 aa5.05□□□□□ -1.6
ITGB1-208ENST00000464001 CCP110O43303 1012 aa5.05□□□□□ -1.6
ITGB1-208ENST00000464001 SNHG28P0DPA3 235 aa5.05□□□□□ -1.6
ITGB1-208ENST00000464001 TIRAPP58753 221 aa5.05□□□□□ -1.6
ITGB1-208ENST00000464001 TWIST1Q15672 202 aa5.05□□□□□ -1.6
ITGB1-208ENST00000464001 ZNF517Q6ZMY9 492 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-208ENST00000464001 OVCH2Q7RTZ1 564 aa5.05□□□□□ -1.6
ITGB1-208ENST00000464001 EXOC8Q8IYI6 725 aa5.05□□□□□ -1.6
ITGB1-208ENST00000464001 NGDNQ8NEJ9 315 aaKnown RBP5.05□□□□□ -1.6
ITGB1-208ENST00000464001 CTHRC1Q96CG8 243 aa5.05□□□□□ -1.6
ITGB1-208ENST00000464001 KRTAP1-5Q9BYS1 174 aa5.05□□□□□ -1.6
ITGB1-208ENST00000464001 DNMT3BQ9UBC3 853 aaKnown RBP5.05□□□□□ -1.6
ITGB1-208ENST00000464001 LPAR3Q9UBY5 353 aa5.05□□□□□ -1.6
ITGB1-208ENST00000464001 MAFFQ9ULX9 164 aa5.05□□□□□ -1.6
ITGB1-208ENST00000464001 TBX3O15119 743 aa5.04□□□□□ -1.6
ITGB1-208ENST00000464001 CD3EAPO15446 510 aaKnown RBP5.04□□□□□ -1.6
ITGB1-208ENST00000464001 TMPRSS11DO60235 418 aa5.04□□□□□ -1.6
ITGB1-208ENST00000464001 RASSF9O75901 435 aa5.04□□□□□ -1.6
ITGB1-208ENST00000464001 APEHP13798 732 aaKnown RBP5.04□□□□□ -1.6
ITGB1-208ENST00000464001 DIO1P49895 249 aa5.04□□□□□ -1.6
ITGB1-208ENST00000464001 SUMO3P55854 103 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms