RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 MMRN2Q9H8L6 949 aa23.5■■□□□ 1.35
PDLIM7-206ENST00000463411 FBRSL1Q9HCM7 1045 aaKnown RBP23.5■■□□□ 1.35
PDLIM7-206ENST00000463411 CFAP97Q9P2B7 532 aa23.5■■□□□ 1.35
PDLIM7-206ENST00000463411 HMGXB4Q9UGU5 601 aa23.5■■□□□ 1.35
PDLIM7-206ENST00000463411 HRO43593 1189 aa23.49■■□□□ 1.35
PDLIM7-206ENST00000463411 RETP07949 1114 aa23.49■■□□□ 1.35
PDLIM7-206ENST00000463411 SDHBP21912 280 aa23.49■■□□□ 1.35
PDLIM7-206ENST00000463411 ZXDBP98169 803 aa23.49■■□□□ 1.35
PDLIM7-206ENST00000463411 SRSF5Q13243 272 aaKnown RBP23.49■■□□□ 1.35
PDLIM7-206ENST00000463411 PUM1Q14671 1186 aaKnown RBP eCLIP23.49■■□□□ 1.353e-7■□□□□ 10.6
PDLIM7-206ENST00000463411 EDRF1Q3B7T1 1238 aa23.49■■□□□ 1.35
PDLIM7-206ENST00000463411 HECTD3Q5T447 861 aa23.49■■□□□ 1.35
PDLIM7-206ENST00000463411 NAIF1Q69YI7 327 aaPredicted RBP23.49■■□□□ 1.35
PDLIM7-206ENST00000463411 RPLP0P6Q8NHW5 317 aa23.49■■□□□ 1.35
PDLIM7-206ENST00000463411 NIF3L1Q9GZT8 377 aa23.49■■□□□ 1.35
PDLIM7-206ENST00000463411 CYP3A43Q9HB55 503 aa23.49■■□□□ 1.35
PDLIM7-206ENST00000463411 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.49■■□□□ 1.353e-10■■■■■ 107.9
PDLIM7-206ENST00000463411 FAM49BQ9NUQ9 324 aa23.49■■□□□ 1.35
PDLIM7-206ENST00000463411 CCDC163A0A0D9SF12 145 aa23.48■■□□□ 1.35
PDLIM7-206ENST00000463411 FAM200BP0CF97 657 aa23.48■■□□□ 1.35
PDLIM7-206ENST00000463411 TUBP50607 506 aa23.48■■□□□ 1.35
PDLIM7-206ENST00000463411 INCA1Q0VD86 236 aa23.48■■□□□ 1.35
PDLIM7-206ENST00000463411 ZCWPW2Q504Y3 356 aa23.48■■□□□ 1.35
PDLIM7-206ENST00000463411 CAMKK1Q8N5S9 505 aa23.48■■□□□ 1.35
PDLIM7-206ENST00000463411 SCAMP5Q8TAC9 235 aa23.48■■□□□ 1.35
PDLIM7-206ENST00000463411 TAS1R2Q8TE23 839 aa23.48■■□□□ 1.35
PDLIM7-206ENST00000463411 NT5C1AQ9BXI3 368 aa23.48■■□□□ 1.35
PDLIM7-206ENST00000463411 NACA2Q9H009 215 aa23.48■■□□□ 1.35
PDLIM7-206ENST00000463411 FBXO44Q9H4M3 255 aa23.48■■□□□ 1.35
PDLIM7-206ENST00000463411 TMEM8AQ9HCN3 771 aa23.48■■□□□ 1.35
PDLIM7-206ENST00000463411 PRR5-ARHGAP8B1AHC4 643 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 TNFRSF10BO14763 440 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 STX10O60499 249 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 LRP3O75074 770 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 ADH1CP00326 375 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 CYP17A1P05093 508 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 ADORA2BP29275 332 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 GTF2H1P32780 548 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 MAP3K7CLP57077 242 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 ARHGAP8P85298 464 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 PPP3CAQ08209 521 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 PNOCQ13519 176 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 DGLUCYQ7Z3D6 616 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 ENGASEQ8NFI3 743 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 SMOQ99835 787 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 CSNK1G1Q9HCP0 422 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 IL37Q9NZH6 218 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 GMIPQ9P107 970 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 TBC1D14Q9P2M4 693 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 CHORDC1Q9UHD1 332 aaPredicted RBP23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 WDR87Q6ZQQ6 2873 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 ATG2BQ96BY7 2078 aa23.47■■□□□ 1.35
PDLIM7-206ENST00000463411 CETN3O15182 167 aa23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 COCHO43405 550 aa23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 CCDC192P0DO97 292 aa23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 EPB41P11171 864 aaKnown RBP23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 SPEM2Q0P670 501 aa23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 RSPO4Q2I0M5 234 aaPredicted RBP23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 SNX30Q5VWJ9 437 aa23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 KRT39Q6A163 491 aa23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 SYT13Q7L8C5 426 aa23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 SMYD4Q8IYR2 804 aaPredicted RBP23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 FMR1NBQ8N0W7 255 aaPredicted RBP23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 C12orf29Q8N999 325 aa23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 GAB3Q8WWW8 586 aa23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 TSG101Q99816 390 aa23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 HOOK1Q9UJC3 728 aaKnown RBP23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 SH3BP1Q9Y3L3 701 aa23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 FRYLO94915 3013 aa23.46■■□□□ 1.35
PDLIM7-206ENST00000463411 E2F8A0AVK6 867 aa23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 FAM92AA1XBS5 289 aa23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 SCAMP3O14828 347 aaKnown RBP23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 RPP40O75818 363 aaKnown RBP23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 SMC2O95347 1197 aa23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 CD58P19256 250 aa23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 OPRD1P41143 372 aa23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 PXNP49023 591 aaPredicted RBP23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 DHCR24Q15392 516 aa23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 ZMIZ2Q8NF64 920 aa23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 OTUB2Q96DC9 234 aa23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 HHIPQ96QV1 700 aa23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 CCSER2Q9H7U1 834 aa23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 APOBEC3GQ9HC16 384 aaKnown RBP23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 TLR8Q9NR97 1041 aaKnown RBP23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 CDV3Q9UKY7 258 aaKnown RBP23.45■■□□□ 1.34
PDLIM7-206ENST00000463411 MBD3O95983 291 aa23.44■■□□□ 1.34
PDLIM7-206ENST00000463411 MXI1P50539 228 aa23.44■■□□□ 1.34
PDLIM7-206ENST00000463411 DMC1Q14565 340 aa23.44■■□□□ 1.34
PDLIM7-206ENST00000463411 ADGRG2Q8IZP9 1017 aa23.44■■□□□ 1.34
PDLIM7-206ENST00000463411 FAM160A2Q8N612 972 aaPredicted RBP23.44■■□□□ 1.34
PDLIM7-206ENST00000463411 EZH1Q92800 747 aaPredicted RBP23.44■■□□□ 1.34
PDLIM7-206ENST00000463411 CYFIP2Q96F07 1278 aa23.44■■□□□ 1.34
PDLIM7-206ENST00000463411 TIGD1Q96MW7 591 aa23.44■■□□□ 1.34
PDLIM7-206ENST00000463411 GSDMAQ96QA5 445 aa23.44■■□□□ 1.34
PDLIM7-206ENST00000463411 HNRNPABQ99729 332 aaKnown RBP23.44■■□□□ 1.34
PDLIM7-206ENST00000463411 GTPBP4Q9BZE4 634 aaKnown RBP23.44■■□□□ 1.34
PDLIM7-206ENST00000463411 PARD6AQ9NPB6 346 aa23.44■■□□□ 1.34
PDLIM7-206ENST00000463411 DLL3Q9NYJ7 618 aa23.44■■□□□ 1.34
PDLIM7-206ENST00000463411 TLR5O60602 858 aa23.43■■□□□ 1.34
PDLIM7-206ENST00000463411 CILPO75339 1184 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms