RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 TMEFF1Q8IYR6 380 aa22.08■■□□□ 1.13
CPSF7-209ENST00000463244 GATA6Q92908 595 aa22.08■■□□□ 1.13
CPSF7-209ENST00000463244 SCNM1Q9BWG6 230 aa22.08■■□□□ 1.13
CPSF7-209ENST00000463244 NUSAP1Q9BXS6 441 aaKnown RBP22.08■■□□□ 1.13
CPSF7-209ENST00000463244 ELOVL4Q9GZR5 314 aa22.08■■□□□ 1.13
CPSF7-209ENST00000463244 KIAA1586Q9HCI6 787 aa22.08■■□□□ 1.13
CPSF7-209ENST00000463244 TMEM74BQ9NUR3 256 aa22.08■■□□□ 1.13
CPSF7-209ENST00000463244 BCCIPQ9P287 314 aaKnown RBP eCLIP22.08■■□□□ 1.13
CPSF7-209ENST00000463244 TBC1D14Q9P2M4 693 aa22.08■■□□□ 1.13
CPSF7-209ENST00000463244 CIZ1Q9ULV3 898 aaPredicted RBP22.08■■□□□ 1.13
CPSF7-209ENST00000463244 TMEM8BA6NDV4 472 aa22.07■■□□□ 1.12
CPSF7-209ENST00000463244 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.07■■□□□ 1.12
CPSF7-209ENST00000463244 MAP3K13O43283 966 aa22.07■■□□□ 1.12
CPSF7-209ENST00000463244 CST3P01034 146 aaPredicted RBP22.07■■□□□ 1.12
CPSF7-209ENST00000463244 FAM163BP0C2L3 166 aa22.07■■□□□ 1.12
CPSF7-209ENST00000463244 MBL2P11226 248 aaPredicted RBP22.07■■□□□ 1.12
CPSF7-209ENST00000463244 PTPN1P18031 435 aaKnown RBP22.07■■□□□ 1.12
CPSF7-209ENST00000463244 TNFRSF4P43489 277 aa22.07■■□□□ 1.12
CPSF7-209ENST00000463244 KDSRQ06136 332 aa22.07■■□□□ 1.12
CPSF7-209ENST00000463244 PHTF2Q8N3S3 785 aa22.07■■□□□ 1.12
CPSF7-209ENST00000463244 OR6B3Q8NGW1 331 aa22.07■■□□□ 1.12
CPSF7-209ENST00000463244 HMGB4Q8WW32 186 aa22.07■■□□□ 1.12
CPSF7-209ENST00000463244 HPS3Q969F9 1004 aa22.07■■□□□ 1.12
CPSF7-209ENST00000463244 ZNF518BQ9C0D4 1074 aa22.07■■□□□ 1.12
CPSF7-209ENST00000463244 DPEP3Q9H4B8 488 aa22.07■■□□□ 1.12
CPSF7-209ENST00000463244 ZDHHC4Q9NPG8 344 aa22.07■■□□□ 1.12
CPSF7-209ENST00000463244 FASNP49327 2511 aaKnown RBP22.06■■□□□ 1.12
CPSF7-209ENST00000463244 DLATP10515 647 aaKnown RBP22.06■■□□□ 1.12
CPSF7-209ENST00000463244 ENGP17813 658 aa22.06■■□□□ 1.12
CPSF7-209ENST00000463244 IFRD2Q12894 506 aaPredicted RBP22.06■■□□□ 1.12
CPSF7-209ENST00000463244 CUL4AQ13619 759 aa22.06■■□□□ 1.12
CPSF7-209ENST00000463244 BYSLQ13895 437 aaKnown RBP22.06■■□□□ 1.12
CPSF7-209ENST00000463244 SNRNP35Q16560 246 aaKnown RBP22.06■■□□□ 1.12
CPSF7-209ENST00000463244 LY6G5CQ5SRR4 150 aa22.06■■□□□ 1.12
CPSF7-209ENST00000463244 PDILTQ8N807 584 aa22.06■■□□□ 1.12
CPSF7-209ENST00000463244 ZFRQ96KR1 1074 aaKnown RBP22.06■■□□□ 1.12
CPSF7-209ENST00000463244 ADAMTS9Q9P2N4 1935 aa22.06■■□□□ 1.12
CPSF7-209ENST00000463244 TCRBV21S2A2A0A5A6 115 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 E2F8A0AVK6 867 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 TNNI1P19237 187 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 YWHAQP27348 245 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 DPP6P42658 865 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 MAPK8P45983 427 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 TNNC1P63316 161 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 SLC39A14Q15043 492 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 WDR72Q3MJ13 1102 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 PEAR1Q5VY43 1037 aaPredicted RBP22.05■■□□□ 1.12
CPSF7-209ENST00000463244 LYSMD4Q5XG99 296 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 SLC23A3Q6PIS1 610 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 NUP93Q8N1F7 819 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 PDZD8Q8NEN9 1154 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 OVCA2Q8WZ82 227 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 OTUB2Q96DC9 234 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 CGRRF1Q99675 332 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 B3GNT5Q9BYG0 378 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 TNMDQ9H2S6 317 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 SLC32A1Q9H598 525 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 UPF2Q9HAU5 1272 aaKnown RBP22.05■■□□□ 1.12
CPSF7-209ENST00000463244 PILRBQ9UKJ0 227 aa22.05■■□□□ 1.12
CPSF7-209ENST00000463244 ITPR1Q14643 2758 aa22.04■■□□□ 1.12
CPSF7-209ENST00000463244 CLDN5O00501 218 aa22.04■■□□□ 1.12
CPSF7-209ENST00000463244 EIF3DO15371 548 aaKnown RBP eCLIP22.04■■□□□ 1.12
CPSF7-209ENST00000463244 COCHO43405 550 aa22.04■■□□□ 1.12
CPSF7-209ENST00000463244 RTN3O95197 1032 aaPredicted RBP22.04■■□□□ 1.12
CPSF7-209ENST00000463244 HOXD12P35452 270 aa22.04■■□□□ 1.12
CPSF7-209ENST00000463244 GAD2Q05329 585 aa22.04■■□□□ 1.12
CPSF7-209ENST00000463244 EPM2AIP1Q7L775 607 aaPredicted RBP22.04■■□□□ 1.12
CPSF7-209ENST00000463244 ETFBKMTQ8IXQ9 262 aa22.04■■□□□ 1.12
CPSF7-209ENST00000463244 RDH13Q8NBN7 331 aa22.04■■□□□ 1.12
CPSF7-209ENST00000463244 B3GALNT2Q8NCR0 500 aa22.04■■□□□ 1.12
CPSF7-209ENST00000463244 KCNV2Q8TDN2 545 aa22.04■■□□□ 1.12
CPSF7-209ENST00000463244 FBXO32Q969P5 355 aa22.04■■□□□ 1.12
CPSF7-209ENST00000463244 USP28Q96RU2 1077 aa22.04■■□□□ 1.12
CPSF7-209ENST00000463244 ATXN2Q99700 1313 aaKnown RBP22.04■■□□□ 1.12
CPSF7-209ENST00000463244 A8MXQ7 604 aa22.03■■□□□ 1.12
CPSF7-209ENST00000463244 TGFB1I1O43294 461 aa22.03■■□□□ 1.12
CPSF7-209ENST00000463244 STAU1O95793 577 aaKnown RBP22.03■■□□□ 1.12
CPSF7-209ENST00000463244 ITPKAP23677 461 aa22.03■■□□□ 1.12
CPSF7-209ENST00000463244 CYP24A1Q07973 514 aa22.03■■□□□ 1.12
CPSF7-209ENST00000463244 PSMD6Q15008 389 aa22.03■■□□□ 1.12
CPSF7-209ENST00000463244 SNX30Q5VWJ9 437 aa22.03■■□□□ 1.12
CPSF7-209ENST00000463244 PIP4P1Q86T03 277 aa22.03■■□□□ 1.12
CPSF7-209ENST00000463244 PGBD3Q8N328 593 aa22.03■■□□□ 1.12
CPSF7-209ENST00000463244 ZNF507Q8TCN5 953 aa22.03■■□□□ 1.12
CPSF7-209ENST00000463244 DUSP9Q99956 384 aaKnown RBP22.03■■□□□ 1.12
CPSF7-209ENST00000463244 TRIM9Q9C026 710 aa22.03■■□□□ 1.12
CPSF7-209ENST00000463244 AGPAT3Q9NRZ7 376 aa22.03■■□□□ 1.12
CPSF7-209ENST00000463244 KBTBD4Q9NVX7 518 aa22.03■■□□□ 1.12
CPSF7-209ENST00000463244 PCDH15Q96QU1 1955 aa22.02■■□□□ 1.12
CPSF7-209ENST00000463244 TBC1D3BA6NDS4 549 aa22.02■■□□□ 1.12
CPSF7-209ENST00000463244 UPK3BL1B0FP48 263 aa22.02■■□□□ 1.12
CPSF7-209ENST00000463244 UPK3BL2E5RIL1 263 aa22.02■■□□□ 1.12
CPSF7-209ENST00000463244 HOXC11O43248 304 aaPredicted RBP22.02■■□□□ 1.12
CPSF7-209ENST00000463244 TULP3O75386 442 aa22.02■■□□□ 1.12
CPSF7-209ENST00000463244 SYT1P21579 422 aa22.02■■□□□ 1.12
CPSF7-209ENST00000463244 HECTD3Q5T447 861 aa22.02■■□□□ 1.12
CPSF7-209ENST00000463244 KIAA1211LQ6NV74 962 aa22.02■■□□□ 1.12
CPSF7-209ENST00000463244 TRMT11Q7Z4G4 463 aaKnown RBP22.02■■□□□ 1.12
CPSF7-209ENST00000463244 ZNF513Q8N8E2 541 aaPredicted RBP22.02■■□□□ 1.12
CPSF7-209ENST00000463244 NAT16Q8N8M0 369 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms