RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 OLFM2O95897 454 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 OAS1P00973 400 aaKnown RBP13.85□□□□□ -0.19
HDAC1-203ENST00000463172 CCDC192P0DO97 292 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 DRD1P21728 446 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 PMS1P54277 932 aaKnown RBP13.85□□□□□ -0.19
HDAC1-203ENST00000463172 FZD5Q13467 585 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 FBXO43Q4G163 708 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 SNX30Q5VWJ9 437 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 TRIM68Q6AZZ1 485 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 PAQR9Q6ZVX9 377 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 ZNF687Q8N1G0 1237 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 PIAS4Q8N2W9 510 aaPredicted RBP13.85□□□□□ -0.19
HDAC1-203ENST00000463172 C12orf29Q8N999 325 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 SCAMP5Q8TAC9 235 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 SECISBP2LQ93073 1101 aaKnown RBP13.85□□□□□ -0.19
HDAC1-203ENST00000463172 TMEM176AQ96HP8 235 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 SLC22A12Q96S37 553 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 SMOQ99835 787 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 P2RY13Q9BPV8 354 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 HPS4Q9NQG7 708 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 CTNND2Q9UQB3 1225 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 COQ4Q9Y3A0 265 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 SH3BP1Q9Y3L3 701 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 WNT6Q9Y6F9 365 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 R4GN57 208 aa13.85□□□□□ -0.19
HDAC1-203ENST00000463172 FAM92AA1XBS5 289 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 TRDMT1O14717 391 aaKnown RBP13.84□□□□□ -0.19
HDAC1-203ENST00000463172 PMM2O15305 246 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 PSEN1P49768 467 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 CUL2Q13617 745 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 EML3Q32P44 896 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 CBWD6Q4V339 395 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 ZNF394Q53GI3 561 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 CBWD3Q5JTY5 395 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 CBWD5Q5RIA9 395 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 TXNDC11Q6PKC3 985 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 CLEC20AQ6ZU45 233 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 SEMA4DQ92854 862 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 SLC35C1Q96A29 364 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 OTUB2Q96DC9 234 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 NT5C1BQ96P26 610 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 CDK5RAP1Q96SZ6 601 aaKnown RBP13.84□□□□□ -0.19
HDAC1-203ENST00000463172 DUSP16Q9BY84 665 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 TMEM30AQ9NV96 361 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 IL37Q9NZH6 218 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 KIAA1468Q9P260 1216 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 HESX1Q9UBX0 185 aa13.84□□□□□ -0.19
HDAC1-203ENST00000463172 CHORDC1Q9UHD1 332 aaPredicted RBP13.84□□□□□ -0.19
HDAC1-203ENST00000463172 VPS13AQ96RL7 3174 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 E2F8A0AVK6 867 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 PPP1R3GB7ZBB8 358 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 ADH1CP00326 375 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 ARSAP15289 507 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 ACO1P21399 889 aaKnown RBP13.83□□□□□ -0.2
HDAC1-203ENST00000463172 GJA4P35212 333 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 FMO5P49326 533 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 CCINQ13939 588 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 PREPLQ4J6C6 727 aaPredicted RBP13.83□□□□□ -0.2
HDAC1-203ENST00000463172 TMEM196Q5HYL7 178 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 TTI2Q6NXR4 508 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 MAML2Q8IZL2 1156 aaPredicted RBP13.83□□□□□ -0.2
HDAC1-203ENST00000463172 ARHGAP18Q8N392 663 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 CD101Q93033 1021 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 JAKMIP2Q96AA8 810 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 TWNKQ96RR1 684 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 HINFPQ9BQA5 517 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 UBXN6Q9BZV1 441 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 RNF38Q9H0F5 515 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 SMPD4Q9NXE4 827 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 GMIPQ9P107 970 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 CFAP97Q9P2B7 532 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 LSM7Q9UK45 103 aaKnown RBP13.83□□□□□ -0.2
HDAC1-203ENST00000463172 RAB23Q9ULC3 237 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 KIAA1257Q9ULG3 409 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 SCML2Q9UQR0 700 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 WDR87Q6ZQQ6 2873 aa13.83□□□□□ -0.2
HDAC1-203ENST00000463172 USP34Q70CQ2 3546 aa13.82□□□□□ -0.2
HDAC1-203ENST00000463172 COCHO43405 550 aa13.82□□□□□ -0.2
HDAC1-203ENST00000463172 TLR5O60602 858 aa13.82□□□□□ -0.2
HDAC1-203ENST00000463172 PAPSS2O95340 614 aaPredicted RBP13.82□□□□□ -0.2
HDAC1-203ENST00000463172 ZDHHC11BP0C7U3 371 aa13.82□□□□□ -0.2
HDAC1-203ENST00000463172 RALAP11233 206 aa13.82□□□□□ -0.2
HDAC1-203ENST00000463172 CD44P16070 742 aaKnown RBP13.82□□□□□ -0.2
HDAC1-203ENST00000463172 ATP5C1P36542 298 aaKnown RBP13.82□□□□□ -0.2
HDAC1-203ENST00000463172 SGO2Q562F6 1265 aa13.82□□□□□ -0.2
HDAC1-203ENST00000463172 PPP1R26Q5T8A7 1209 aaPredicted RBP13.82□□□□□ -0.2
HDAC1-203ENST00000463172 ARHGAP17Q68EM7 881 aa13.82□□□□□ -0.2
HDAC1-203ENST00000463172 ASCL5Q7RTU5 278 aa13.82□□□□□ -0.2
HDAC1-203ENST00000463172 ZMIZ2Q8NF64 920 aa13.82□□□□□ -0.2
HDAC1-203ENST00000463172 WHAMMQ8TF30 809 aa13.82□□□□□ -0.2
HDAC1-203ENST00000463172 RBM12Q9NTZ6 932 aaKnown RBP13.82□□□□□ -0.2
HDAC1-203ENST00000463172 SLC8A2Q9UPR5 921 aa13.82□□□□□ -0.2
HDAC1-203ENST00000463172 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.82□□□□□ -0.2
HDAC1-203ENST00000463172 MYO15AQ9UKN7 3530 aa13.81□□□□□ -0.2
HDAC1-203ENST00000463172 EP300Q09472 2414 aaPredicted RBP13.81□□□□□ -0.2
HDAC1-203ENST00000463172 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.81□□□□□ -0.2
HDAC1-203ENST00000463172 BEST1O76090 585 aa13.81□□□□□ -0.2
HDAC1-203ENST00000463172 AFPP02771 609 aaKnown RBP13.81□□□□□ -0.2
HDAC1-203ENST00000463172 CD19P15391 556 aa13.81□□□□□ -0.2
HDAC1-203ENST00000463172 CNR2P34972 360 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms