RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 TRPC7Q9HCX4 862 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 DUS2Q9NX74 493 aaKnown RBP8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 UXTQ9UBK9 157 aaPredicted RBP8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 GTF3C4Q9UKN8 822 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 ITGA11Q9UKX5 1188 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 WASF3Q9UPY6 502 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 TRAF3IP3Q9Y228 551 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 NME7Q9Y5B8 376 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 ACACAQ13085 2346 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 TRAV19A0A0A6YYK7 116 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 GOLGA6L4A6NEF3 574 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 LRRIQ3A6PVS8 624 aaPredicted RBP8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 K7EQS6 105 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 GIPC1O14908 333 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 HUS1O60921 280 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 ATP2C2O75185 946 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 NR3C1P04150 777 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 CKMP06732 381 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 USP17L7P0C7H9 530 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 TMEM191BP0C7N4 346 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 BCKDHBP21953 392 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 MAGEA11P43364 429 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 IFNAR2P48551 515 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 USP46P62068 366 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 PSMC1P62191 440 aaKnown RBP8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 RPL10AP62906 217 aaKnown RBP8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 AMPD2Q01433 879 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 MYL7Q01449 175 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 MESP2Q0VG99 397 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 SOWAHAQ2M3V2 549 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 COBLL1Q53SF7 1204 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 ARSIQ5FYB1 569 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 C1orf220Q5T0J3 134 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 RNF43Q68DV7 783 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 PSAPL1Q6NUJ1 521 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 TMEM92Q6UXU6 159 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 SFTPA1Q8IWL2 248 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 ELOA2Q8IYF1 753 aaPredicted RBP8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 ARL14EPQ8N8R7 260 aaPredicted RBP8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 RDH13Q8NBN7 331 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 MDGA1Q8NFP4 955 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 GOLGA5Q8TBA6 731 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 SH3RF2Q8TEC5 729 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 USP33Q8TEY7 942 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 MYLPFQ96A32 169 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 ANKRD36BP1Q96IX9 119 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 TPSD1Q9BZJ3 242 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 LINC00597Q9H2U6 94 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 CRTAC1Q9NQ79 661 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 TMEM30AQ9NV96 361 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 RALYQ9UKM9 306 aaKnown RBP8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 ARHGAP26Q9UNA1 814 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 MAPK8IP1Q9UQF2 711 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 PCDHA5Q9Y5H7 936 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 SNX9Q9Y5X1 595 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 KNL1Q8NG31 2342 aa8.45□□□□□ -1.06
CDC42BPA-210ENST00000462553 TP53BP1Q12888 1972 aaPredicted RBP8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 GCN1Q92616 2671 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 C4orf47A7E2U8 309 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 PATE3B3GLJ2 98 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 EXOC3O60645 756 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 OLFM2O95897 454 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 CYP17A1P05093 508 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 DLATP10515 647 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 BMP6P22004 513 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 LMO2P25791 158 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 PRCPP42785 496 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 UBE2HP62256 183 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 CLDN10P78369 228 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 CREB5Q02930 508 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 SURF1Q15526 300 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 ELF2Q15723 593 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 DUOXA2Q1HG44 320 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 ZNF658Q5TYW1 1059 aaPredicted RBP8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 TDRD10Q5VZ19 366 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 CLEC17AQ6ZS10 378 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 TRAPPC11Q7Z392 1133 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 SPATA2LQ8IUW3 424 aaPredicted RBP8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 ZC3H3Q8IXZ2 948 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 CSGALNACT2Q8N6G5 542 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 TTC16Q8NEE8 873 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 TSTD1Q8NFU3 115 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 OLIG1Q8TAK6 271 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 PARD3BQ8TEW8 1205 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 CACTINQ8WUQ7 758 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 CCDC47Q96A33 483 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 SPATA17Q96L03 361 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 CNOT6LQ96LI5 555 aaKnown RBP8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 GSDMAQ96QA5 445 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 SYT15Q9BQS2 421 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 TTLL2Q9BWV7 592 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 MAN1B1Q9UKM7 699 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 MMP17Q9ULZ9 603 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 INVSQ9Y283 1065 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 APC2O95996 2303 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 CKAP5Q14008 2032 aa8.44□□□□□ -1.06
CDC42BPA-210ENST00000462553 PLXNB3Q9ULL4 1909 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 PTPRBP23467 1997 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 C1QTNF9BB2RNN3 333 aa8.43□□□□□ -1.06
CDC42BPA-210ENST00000462553 LEFTY2O00292 366 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms