RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 BEST1O76090 585 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 STAT1P42224 750 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 ACADSBP45954 432 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 TKTL1P51854 596 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 POLR2FP61218 127 aaKnown RBP10.08□□□□□ -0.8
PKP4-208ENST00000462335 USP46P62068 366 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 PDE4CQ08493 712 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 DRAP1Q14919 205 aaPredicted RBP10.08□□□□□ -0.8
PKP4-208ENST00000462335 SLC44A4Q53GD3 710 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 C10orf120Q5SQS8 335 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 KLHDC7AQ5VTJ3 777 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 BTBD8Q5XKL5 378 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 PIGZQ86VD9 579 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 MSANTD4Q8NCY6 345 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 ANP32EQ9BTT0 268 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 RPP25Q9BUL9 199 aaKnown RBP10.08□□□□□ -0.8
PKP4-208ENST00000462335 STK33Q9BYT3 514 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 SMG9Q9H0W8 520 aaKnown RBP10.08□□□□□ -0.8
PKP4-208ENST00000462335 TRPV4Q9HBA0 871 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 CBX8Q9HC52 389 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 NLRC4Q9NPP4 1024 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 SMPD4Q9NXE4 827 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 OBP2AQ9NY56 170 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 LSM7Q9UK45 103 aaKnown RBP10.08□□□□□ -0.8
PKP4-208ENST00000462335 DAAM1Q9Y4D1 1078 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 DENND4AQ7Z401 1863 aa10.08□□□□□ -0.8
PKP4-208ENST00000462335 C2orf78A6NCI8 922 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 RNF225M0QZC1 329 aaPredicted RBP10.07□□□□□ -0.8
PKP4-208ENST00000462335 O00370 1275 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 FOXN3O00409 490 aaPredicted RBP10.07□□□□□ -0.8
PKP4-208ENST00000462335 MAN2B1O00754 1011 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 CAPN9O14815 690 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 CHADO15335 359 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 NCAM2O15394 837 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 SART1O43290 800 aaKnown RBP10.07□□□□□ -0.8
PKP4-208ENST00000462335 TLR5O60602 858 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 ZBED1O96006 694 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 RARGP13631 454 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 UCHL3P15374 230 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 WEE1P30291 646 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 RGS7P49802 495 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 KIF11P52732 1056 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 UBASH3AP57075 661 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 APBA1Q02410 837 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 ADIGQ0VDE8 80 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 PDGFRLQ15198 375 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 SMYD5Q6GMV2 418 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 VITQ6UXI7 678 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 ZNF852Q6ZMS4 543 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 LUZP1Q86V48 1076 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 DHX40Q8IX18 779 aaKnown RBP10.07□□□□□ -0.8
PKP4-208ENST00000462335 ZNF397Q8NF99 534 aaPredicted RBP10.07□□□□□ -0.8
PKP4-208ENST00000462335 SH3RF2Q8TEC5 729 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 ZNF606Q8WXB4 792 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 SECISBP2LQ93073 1101 aaKnown RBP10.07□□□□□ -0.8
PKP4-208ENST00000462335 TRIM62Q9BVG3 475 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 PLA2G2FQ9BZM2 168 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 MIS12Q9H081 205 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 PLCB1Q9NQ66 1216 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 ARHGEF3Q9NR81 526 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 SLC2A4RGQ9NR83 387 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 GKN1Q9NS71 199 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 SEPT11Q9NVA2 429 aaKnown RBP10.07□□□□□ -0.8
PKP4-208ENST00000462335 DUS2Q9NX74 493 aaKnown RBP10.07□□□□□ -0.8
PKP4-208ENST00000462335 DNMT3LQ9UJW3 386 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.07□□□□□ -0.8
PKP4-208ENST00000462335 CPQQ9Y646 472 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 NOTCH4Q99466 2003 aa10.07□□□□□ -0.8
PKP4-208ENST00000462335 DOCK8Q8NF50 2099 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 SPTBN5Q9NRC6 3674 aaKnown RBP10.06□□□□□ -0.8
PKP4-208ENST00000462335 TTC28Q96AY4 2481 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 A0A1W2PQH9 124 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 LRRC10BA6NIK2 292 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 PRR33A8MZF0 331 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 PIK3R2O00459 728 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 TNFRSF10BO14763 440 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 CBFA2T2O43439 604 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 GPR37L1O60883 481 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 GFPT2O94808 682 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 FBXO21O94952 628 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 TPM1P09493 284 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 IRF1P10914 325 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 ATP1A3P13637 1013 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 PLA2G4AP47712 749 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 TUBP50607 506 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 YWHAGP61981 247 aaKnown RBP eCLIP10.06□□□□□ -0.8
PKP4-208ENST00000462335 ARID5AQ03989 594 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 KCNMA1Q12791 1236 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 ZNF268Q14587 947 aaPredicted RBP10.06□□□□□ -0.8
PKP4-208ENST00000462335 MTF1Q14872 753 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 UBXN2BQ14CS0 331 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 NCAPHQ15003 741 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 MLF2Q15773 248 aaPredicted RBP10.06□□□□□ -0.8
PKP4-208ENST00000462335 ITPRIPL2Q3MIP1 535 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 C1orf228Q6PIY5 440 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 CCDC186Q7Z3E2 898 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 TMEM150AQ86TG1 271 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 CPA6Q8N4T0 437 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 TMEM35BQ8NCS4 154 aa10.06□□□□□ -0.8
PKP4-208ENST00000462335 ZMIZ2Q8NF64 920 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms