RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 NXPH3O95157 252 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 ONECUT2O95948 504 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 ELANEP08246 267 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 SRGNP10124 158 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 LAG3P18627 525 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 ZEB1P37275 1124 aaPredicted RBP3.53□□□□□ -1.84
HDAC6-212ENST00000461608 RGS19P49795 217 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 PGDP52209 483 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 ITGA8P53708 1063 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 NXPH1P58417 271 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 ZIK1Q3SY52 487 aaPredicted RBP3.53□□□□□ -1.84
HDAC6-212ENST00000461608 TMTC4Q5T4D3 741 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 ATPAF1Q5TC12 328 aaPredicted RBP3.53□□□□□ -1.84
HDAC6-212ENST00000461608 MANEALQ5VSG8 457 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 ZNF280BQ86YH2 543 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 AMER2Q8N7J2 671 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 B3GALNT2Q8NCR0 500 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 NSUN7Q8NE18 718 aaKnown RBP3.53□□□□□ -1.84
HDAC6-212ENST00000461608 STT3BQ8TCJ2 826 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 SPPL3Q8TCT6 385 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 SLC25A43Q8WUT9 341 aaPredicted RBP3.53□□□□□ -1.84
HDAC6-212ENST00000461608 ATRIPQ8WXE1 791 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 USP13Q92995 863 aaPredicted RBP3.53□□□□□ -1.84
HDAC6-212ENST00000461608 SDCCAG3Q96C92 435 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 C18orf8Q96DM3 657 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 MYEOVQ96EZ4 313 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 RTKNQ9BST9 563 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 VN1R3Q9BXE9 311 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 GJB4Q9NTQ9 266 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 TMLHEQ9NVH6 421 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 TBCCD1Q9NVR7 557 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 GRHPRQ9UBQ7 328 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 STEAP1Q9UHE8 339 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 VPS51Q9UID3 782 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 LZTS1Q9Y250 596 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 PCDHGB3Q9Y5G1 929 aa3.53□□□□□ -1.84
HDAC6-212ENST00000461608 LRRFIP2Q9Y608 721 aaKnown RBP3.53□□□□□ -1.84
HDAC6-212ENST00000461608 COL15A1P39059 1388 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 TMEM200CA6NKL6 621 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 AQP12BA6NM10 295 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 EFCAB8A8MWE9 144 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 AHRRA9YTQ3 701 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 PSMD9O00233 223 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 PIP5K1BO14986 540 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 NCAM2O15394 837 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 PROM1O43490 865 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 NCR1O76036 304 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 NTSR2O95665 410 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 CSF1RP07333 972 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 PECAM1P16284 738 aaPredicted RBP3.52□□□□□ -1.85
HDAC6-212ENST00000461608 CD53P19397 219 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 CST5P28325 142 aaPredicted RBP3.52□□□□□ -1.85
HDAC6-212ENST00000461608 DDIT3P35638 169 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 CDK7P50613 346 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 AP2B1P63010 937 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 GUCY1B3Q02153 619 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 CSHL1Q14406 222 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 RALBP1Q15311 655 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 TAF12Q16514 161 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 GEN1Q17RS7 908 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 NBPF8Q3BBV2 869 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 TRIM60Q495X7 471 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 CD300EQ496F6 205 aaPredicted RBP3.52□□□□□ -1.85
HDAC6-212ENST00000461608 FBXO47Q5MNV8 452 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 ZNF618Q5T7W0 954 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 ANKRD45Q5TZF3 282 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 RAP1GAP2Q684P5 730 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 DENND2CQ68D51 928 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 ABLIM2Q6H8Q1 611 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 LIN54Q6MZP7 749 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 MMS22LQ6ZRQ5 1243 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 DTX2Q86UW9 622 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 CCDC117Q8IWD4 279 aaPredicted RBP3.52□□□□□ -1.85
HDAC6-212ENST00000461608 ABRAQ8N0Z2 381 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 ZNF276Q8N554 614 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 TEX19Q8NA77 164 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 CPEB3Q8NE35 698 aaKnown RBP3.52□□□□□ -1.85
HDAC6-212ENST00000461608 NGDNQ8NEJ9 315 aaKnown RBP3.52□□□□□ -1.85
HDAC6-212ENST00000461608 DNAJB14Q8TBM8 379 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 OTUD7AQ8TE49 926 aaPredicted RBP3.52□□□□□ -1.85
HDAC6-212ENST00000461608 STYXQ8WUJ0 223 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 PPP2R3CQ969Q6 453 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 LRIG1Q96JA1 1093 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 PGBD1Q96JS3 809 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 ZSCAN31Q96LW9 406 aaPredicted RBP3.52□□□□□ -1.85
HDAC6-212ENST00000461608 HIST1H2AAQ96QV6 131 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 WDR24Q96S15 920 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 PYM1Q9BRP8 204 aaKnown RBP3.52□□□□□ -1.85
HDAC6-212ENST00000461608 TPSD1Q9BZJ3 242 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 IKZF4Q9H2S9 585 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 SMOC2Q9H3U7 446 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 SERHL2Q9H4I8 314 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 UNKLQ9H9P5 680 aaKnown RBP3.52□□□□□ -1.85
HDAC6-212ENST00000461608 GLOD4Q9HC38 313 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 SEPSECSQ9HD40 501 aaKnown RBP3.52□□□□□ -1.85
HDAC6-212ENST00000461608 PRDM8Q9NQV8 689 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 RASSF1Q9NS23 344 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 RXFP3Q9NSD7 469 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 IGSF9Q9P2J2 1179 aa3.52□□□□□ -1.85
HDAC6-212ENST00000461608 PDP2Q9P2J9 529 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms