RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 SEPT11Q9NVA2 429 aaKnown RBP15.19■□□□□ 0.02
COL5A3-202ENST00000461214 ASB3Q9Y575 518 aa15.19■□□□□ 0.02
COL5A3-202ENST00000461214 NCANO14594 1321 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 PER2O15055 1255 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 GALR2O43603 387 aaPredicted RBP15.18■□□□□ 0.02
COL5A3-202ENST00000461214 BEST1O76090 585 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 LRG1P02750 347 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 PTMAP06454 111 aaKnown RBP15.18■□□□□ 0.02
COL5A3-202ENST00000461214 CFHP08603 1231 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 UNGP13051 313 aaPredicted RBP15.18■□□□□ 0.02
COL5A3-202ENST00000461214 CYLC1P35663 651 aaPredicted RBP15.18■□□□□ 0.02
COL5A3-202ENST00000461214 EIF4A3P38919 411 aaKnown RBP15.18■□□□□ 0.02
COL5A3-202ENST00000461214 ACADSBP45954 432 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 NSFP46459 744 aaKnown RBP15.18■□□□□ 0.02
COL5A3-202ENST00000461214 RPL34P49207 117 aaKnown RBP15.18■□□□□ 0.02
COL5A3-202ENST00000461214 KIF11P52732 1056 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 CACNA2D1P54289 1103 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 EPHB3P54753 998 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 ASTE1Q2TB18 679 aaPredicted RBP15.18■□□□□ 0.02
COL5A3-202ENST00000461214 RAB41Q5JT25 222 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 PPM1LQ5SGD2 360 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 RBM23Q86U06 439 aaKnown RBP15.18■□□□□ 0.02
COL5A3-202ENST00000461214 ITIH5Q86UX2 942 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 PIGZQ86VD9 579 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 SCN4BQ8IWT1 228 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 LRRC8AQ8IWT6 810 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 SCML4Q8N228 414 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 C1orf131Q8NDD1 294 aaKnown RBP15.18■□□□□ 0.02
COL5A3-202ENST00000461214 CMASQ8NFW8 434 aaPredicted RBP15.18■□□□□ 0.02
COL5A3-202ENST00000461214 TRMT2BQ96GJ1 504 aaKnown RBP15.18■□□□□ 0.02
COL5A3-202ENST00000461214 MSLNLQ96KJ4 702 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 CCDC42Q96M95 316 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 NHEJ1Q9H9Q4 299 aaPredicted RBP15.18■□□□□ 0.02
COL5A3-202ENST00000461214 COMMD8Q9NX08 183 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 SLC27A5Q9Y2P5 690 aa15.18■□□□□ 0.02
COL5A3-202ENST00000461214 USP15Q9Y4E8 981 aaPredicted RBP15.18■□□□□ 0.02
COL5A3-202ENST00000461214 MED19A0JLT2 244 aaPredicted RBP15.17■□□□□ 0.02
COL5A3-202ENST00000461214 HHLA1C9JL84 531 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 DDX3XO00571 662 aaKnown RBP eCLIP15.17■□□□□ 0.02
COL5A3-202ENST00000461214 AKR1B10O60218 316 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 RTN3O95197 1032 aaPredicted RBP15.17■□□□□ 0.02
COL5A3-202ENST00000461214 GLP2RO95838 553 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 CSH1P0DML2 217 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 CSH2P0DML3 217 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 GSCP56915 257 aaPredicted RBP15.17■□□□□ 0.02
COL5A3-202ENST00000461214 TWF1Q12792 350 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 NAA35Q5VZE5 725 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 PHF13Q86YI8 300 aaPredicted RBP15.17■□□□□ 0.02
COL5A3-202ENST00000461214 ELMOD1Q8N336 334 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 UBA3Q8TBC4 463 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 TRIM11Q96F44 468 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 KCNK16Q96T55 309 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 CHP1Q99653 195 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 TTLL2Q9BWV7 592 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 SLC4A5Q9BY07 1137 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 FBXO44Q9H4M3 255 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 CLEC1BQ9P126 229 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 ADAMTS1Q9UHI8 967 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 STRIP2Q9ULQ0 834 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 NENFQ9UMX5 172 aa15.17■□□□□ 0.02
COL5A3-202ENST00000461214 A0A087X0T9 212 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 SPDYE4A6NLX3 237 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 TNFRSF10BO14763 440 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 ARHGAP6O43182 974 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 SART1O43290 800 aaKnown RBP15.16■□□□□ 0.02
COL5A3-202ENST00000461214 XYLBO75191 536 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 RTN2O75298 545 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 FBXO21O94952 628 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 IPO7O95373 1038 aaKnown RBP15.16■□□□□ 0.02
COL5A3-202ENST00000461214 LCA5LO95447 670 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 SPATA31D3P0C874 917 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 FAM228BP0C875 321 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 HOXB8P17481 243 aaPredicted RBP15.16■□□□□ 0.02
COL5A3-202ENST00000461214 SLC5A3P53794 718 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 C1QBPQ07021 282 aaKnown RBP15.16■□□□□ 0.02
COL5A3-202ENST00000461214 CBX2Q14781 532 aaPredicted RBP15.16■□□□□ 0.02
COL5A3-202ENST00000461214 PMF1Q6P1K2 205 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 SPATA31D4Q6ZUB0 917 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 DENND5BQ6ZUT9 1274 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 MON1BQ7L1V2 547 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 ZDHHC17Q8IUH5 632 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 NUP93Q8N1F7 819 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 SIX6OS1Q8N1H7 587 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 LEMD2Q8NC56 503 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 SMRP1Q8NCR6 262 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 VN1R2Q8NFZ6 395 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 NKD2Q969F2 451 aaPredicted RBP15.16■□□□□ 0.02
COL5A3-202ENST00000461214 PSMG2Q969U7 264 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 VCPIP1Q96JH7 1222 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 PCDHB18PQ96TA0 734 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL5A3-202ENST00000461214 PHF7Q9BWX1 381 aaPredicted RBP15.16■□□□□ 0.02
COL5A3-202ENST00000461214 LRRC4Q9HBW1 653 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 LUC7LQ9NQ29 371 aaKnown RBP15.16■□□□□ 0.02
COL5A3-202ENST00000461214 CNGB3Q9NQW8 809 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 UXTQ9UBK9 157 aaPredicted RBP15.16■□□□□ 0.02
COL5A3-202ENST00000461214 CYTH4Q9UIA0 394 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 NAGPAQ9UK23 515 aa15.16■□□□□ 0.02
COL5A3-202ENST00000461214 FAM92AA1XBS5 289 aa15.15■□□□□ 0.02
COL5A3-202ENST00000461214 SOWAHDA6NJG2 315 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms