RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 DDX20Q9UHI6 824 aaKnown RBP5.48□□□□□ -1.53
SF3A3-202ENST00000460925 SCOCQ9UIL1 159 aa5.48□□□□□ -1.53
SF3A3-202ENST00000460925 PCDHA6Q9UN73 950 aa5.48□□□□□ -1.53
SF3A3-202ENST00000460925 GABRQQ9UN88 632 aa5.48□□□□□ -1.53
SF3A3-202ENST00000460925 DNM3Q9UQ16 869 aa5.48□□□□□ -1.53
SF3A3-202ENST00000460925 MRPL11Q9Y3B7 192 aaKnown RBP5.48□□□□□ -1.53
SF3A3-202ENST00000460925 SCINQ9Y6U3 715 aa5.48□□□□□ -1.53
SF3A3-202ENST00000460925 MKI67P46013 3256 aaKnown RBP5.47□□□□□ -1.53
SF3A3-202ENST00000460925 ESYT2A0FGR8 921 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 H3BML4 177 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 hCG_1984214I3L0E3 225 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 TULP2O00295 520 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 PES1O00541 588 aaKnown RBP5.47□□□□□ -1.53
SF3A3-202ENST00000460925 ATP2A1O14983 1001 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 FOXN1O15353 648 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 KIF1CO43896 1103 aaKnown RBP5.47□□□□□ -1.53
SF3A3-202ENST00000460925 OPHN1O60890 802 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 APOL3O95236 402 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 IPO7O95373 1038 aaKnown RBP5.47□□□□□ -1.53
SF3A3-202ENST00000460925 TDP2O95551 362 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 PDCP20941 246 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 ADORA2AP29274 412 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 MAP2K2P36507 400 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 STAT5AP42229 794 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 GCLCP48506 637 aaPredicted RBP5.47□□□□□ -1.53
SF3A3-202ENST00000460925 HSD17B4P51659 736 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 TERF1P54274 439 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 OAZ1P54368 228 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 CEBPZQ03701 1054 aaKnown RBP5.47□□□□□ -1.53
SF3A3-202ENST00000460925 CACNB2Q08289 660 aaPredicted RBP5.47□□□□□ -1.53
SF3A3-202ENST00000460925 NFATC3Q12968 1075 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 MALLQ13021 153 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 NOLC1Q14978 699 aaKnown RBP eCLIP5.47□□□□□ -1.53
SF3A3-202ENST00000460925 ADRM1Q16186 407 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 CCL14Q16627 93 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 FYB2Q5VWT5 728 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 LIPIQ6XZB0 460 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 CXXC5Q7LFL8 322 aaKnown RBP5.47□□□□□ -1.53
SF3A3-202ENST00000460925 BMP8AQ7Z5Y6 402 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 ATG4DQ86TL0 474 aaPredicted RBP5.47□□□□□ -1.53
SF3A3-202ENST00000460925 ANKRD35Q8N283 1001 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 ZNF713Q8N859 430 aaPredicted RBP5.47□□□□□ -1.53
SF3A3-202ENST00000460925 GPRC5AQ8NFJ5 357 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 TBCKQ8TEA7 893 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 WASF1Q92558 559 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 ALG3Q92685 438 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 FATE1Q969F0 183 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 C1GALT1C1Q96EU7 318 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 MVB12AQ96EY5 273 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 TMEM209Q96SK2 561 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 ACE2Q9BYF1 805 aaPredicted RBP5.47□□□□□ -1.53
SF3A3-202ENST00000460925 OR10A5Q9H207 317 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 MTG2Q9H4K7 406 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 PCDH18Q9HCL0 1135 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 ZCCHC17Q9NP64 241 aaKnown RBP5.47□□□□□ -1.53
SF3A3-202ENST00000460925 SH3GLB2Q9NR46 395 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 DLL4Q9NR61 685 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 PCMTD2Q9NV79 361 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 FLRT1Q9NZU1 646 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 KCMF1Q9P0J7 381 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 KIF3AQ9Y496 699 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 PAXBP1Q9Y5B6 917 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 PCDHB6Q9Y5E3 794 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 DNAH12Q6ZR08 3092 aa5.47□□□□□ -1.53
SF3A3-202ENST00000460925 GCOM1H8Y6P7 765 aaPredicted RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 TNPO2O14787 897 aaKnown RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 SLC37A4O43826 429 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 CUTAO60888 179 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 SLC25A27O95847 323 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 ZBED1O96006 694 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 CELA3BP08861 270 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 POLR2MP0CAP2 368 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 HSPA1AP0DMV8 641 aaKnown RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 HSPA1BP0DMV9 641 aaKnown RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 MYCLP12524 364 aaPredicted RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 NCAM1P13591 858 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 XBP1P17861 261 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 CYP2B6P20813 491 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 PSMC4P43686 418 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 TOB1P50616 345 aaPredicted RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 ALDH5A1P51649 535 aaPredicted RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 NAP1L1P55209 391 aaKnown RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 SP3Q02447 781 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 PRKCZQ05513 592 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 GRB14Q14449 540 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 ZNF267Q14586 743 aaPredicted RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 BRD3Q15059 726 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 E2F5Q15329 346 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 SAFBQ15424 915 aaKnown RBP eCLIP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 LETM2Q2VYF4 491 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 TMEM63BQ5T3F8 832 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 KANK2Q63ZY3 851 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 CCDC70Q6NSX1 233 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 LRSAM1Q6UWE0 723 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 RNF207Q6ZRF8 634 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 CBLL1Q75N03 491 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 PLEKHH3Q7Z736 793 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 FBXO16Q8IX29 292 aaPredicted RBP5.46□□□□□ -1.54
SF3A3-202ENST00000460925 CHST13Q8NET6 341 aa5.46□□□□□ -1.54
SF3A3-202ENST00000460925 PPP1R14CQ8TAE6 165 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms