RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 LMO3Q8TAP4 145 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 ZFYVE19Q96K21 471 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 NT5C1BQ96P26 610 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 PKMYT1Q99640 499 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 SEPT5Q99719 369 aaPredicted RBP10.05□□□□□ -0.8
COL6A2-207ENST00000460886 ARID3AQ99856 593 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 CRACR2AQ9BSW2 395 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 KIF9Q9HAQ2 790 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 ABCB6Q9NP58 842 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 C2orf42Q9NWW7 574 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 TAB2Q9NYJ8 693 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 GCNT4Q9P109 453 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 HMGXB4Q9UGU5 601 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 PCDHB5Q9Y5E4 795 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 ANAPC1Q9H1A4 1944 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 CHD8Q9HCK8 2581 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 CACNA1BQ00975 2339 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 SMTNL1A8MU46 457 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 CHURC1-FNTBB4DL54 471 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 TRDMT1O14717 391 aaKnown RBP10.04□□□□□ -0.8
COL6A2-207ENST00000460886 SLC30A4O14863 429 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 CDK11BP21127 795 aaKnown RBP10.04□□□□□ -0.8
COL6A2-207ENST00000460886 CYP2F1P24903 491 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 FNTBP49356 437 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 CYP4F8P98187 520 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 CYP27A1Q02318 531 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 TNK2Q07912 1038 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 SPEM2Q0P670 501 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 INCA1Q0VD86 236 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 CUL2Q13617 745 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 SIM2Q14190 667 aaPredicted RBP10.04□□□□□ -0.8
COL6A2-207ENST00000460886 ZNF268Q14587 947 aaPredicted RBP10.04□□□□□ -0.8
COL6A2-207ENST00000460886 PON2Q15165 354 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 KRT31Q15323 416 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 MAPRE1Q15691 268 aaKnown RBP10.04□□□□□ -0.8
COL6A2-207ENST00000460886 TMEM196Q5HYL7 178 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 MIIPQ5JXC2 388 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 GBP6Q6ZN66 633 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 C4orf50Q6ZRC1 276 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 ACOT1Q86TX2 421 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 UNC93AQ86WB7 457 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 DHX40Q8IX18 779 aaKnown RBP10.04□□□□□ -0.8
COL6A2-207ENST00000460886 PPM1KQ8N3J5 372 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 B3GALNT2Q8NCR0 500 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 MYCBPAPQ8TBZ2 947 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 NETO1Q8TDF5 533 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 MYLPFQ96A32 169 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 TRMT2BQ96GJ1 504 aaKnown RBP10.04□□□□□ -0.8
COL6A2-207ENST00000460886 PCED1BQ96HM7 432 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 FAXDC2Q96IV6 333 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 TNIP3Q96KP6 325 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 MYRFLQ96LU7 910 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 GCNAQ96QF7 691 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 BPIFA3Q9BQP9 254 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 INTS2Q9H0H0 1204 aaKnown RBP10.04□□□□□ -0.8
COL6A2-207ENST00000460886 NDST4Q9H3R1 872 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 HPS4Q9NQG7 708 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 SEMA4GQ9NTN9 838 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 THG1LQ9NWX6 298 aaKnown RBP10.04□□□□□ -0.8
COL6A2-207ENST00000460886 USP18Q9UMW8 372 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 MYO16Q9Y6X6 1858 aa10.04□□□□□ -0.8
COL6A2-207ENST00000460886 PTPRDP23468 1912 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 HELZP42694 1942 aaKnown RBP10.03□□□□□ -0.8
COL6A2-207ENST00000460886 LAMA1P25391 3075 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 GTPBP10A4D1E9 387 aaKnown RBP10.03□□□□□ -0.8
COL6A2-207ENST00000460886 OTOL1A6NHN0 477 aaPredicted RBP10.03□□□□□ -0.8
COL6A2-207ENST00000460886 BECN2A8MW95 431 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 CLDN5O00501 218 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 CILPO75339 1184 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 NOL4O94818 638 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 TPM2P07951 284 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 CSH1P0DML2 217 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 CSH2P0DML3 217 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 SLC9A1P19634 815 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 BDNFP23560 247 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 TBXAS1P24557 533 aaPredicted RBP10.03□□□□□ -0.8
COL6A2-207ENST00000460886 RUNX3Q13761 415 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 EXOC3L4Q17RC7 722 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 CFAP221Q4G0U5 840 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 ZNF394Q53GI3 561 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 PRR23CQ6ZRP0 262 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 RRAGAQ7L523 313 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 MON1AQ86VX9 555 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 GPIHBP1Q8IV16 184 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 ARHGEF19Q8IW93 802 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 CRYBG2Q8N1P7 616 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 ANKRD20A12PQ8NF67 263 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 RIN3Q8TB24 985 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 FAM200AQ8TCP9 573 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 WHAMMQ8TF30 809 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 USP13Q92995 863 aaPredicted RBP10.03□□□□□ -0.8
COL6A2-207ENST00000460886 FUBP3Q96I24 572 aaKnown RBP eCLIP10.03□□□□□ -0.8
COL6A2-207ENST00000460886 LOXL4Q96JB6 756 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 TWNKQ96RR1 684 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 NT5C1AQ9BXI3 368 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 VPS16Q9H269 839 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 HSD3B7Q9H2F3 369 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 GKN1Q9NS71 199 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 CISHQ9NSE2 258 aa10.03□□□□□ -0.8
COL6A2-207ENST00000460886 TDP1Q9NUW8 608 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms