RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 USP41Q3LFD5 358 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 CFAP221Q4G0U5 840 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 TEX35Q5T0J7 233 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 C4orf50Q6ZRC1 276 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 SPRED2Q7Z698 418 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 SCN4BQ8IWT1 228 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 NIPA2Q8N8Q9 360 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 FNIP1Q8TF40 1166 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 TMEM169Q96HH4 297 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 CARD9Q9H257 536 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 RBM12Q9NTZ6 932 aaKnown RBP17.66■□□□□ 0.42
NELFCD-201ENST00000460601 PCSK1NQ9UHG2 260 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 NR2E1Q9Y466 385 aa17.66■□□□□ 0.42
NELFCD-201ENST00000460601 PSRC1Q6PGN9 363 aaPredicted RBP17.65■□□□□ 0.42
NELFCD-201ENST00000460601 ANKS3Q6ZW76 656 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 ZDHHC17Q8IUH5 632 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 DCP1BQ8IZD4 617 aaKnown RBP17.65■□□□□ 0.42
NELFCD-201ENST00000460601 SPATA4Q8NEY3 305 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 PBKQ96KB5 322 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 ZWILCHQ9H900 591 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 CYLDQ9NQC7 956 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 CHST7Q9NS84 486 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 TCRBV7S2A1N4TA0A589 114 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 PI4K2BG5E9Z4 385 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 SLC5A3P53794 718 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 RWDD2BP57060 319 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 HTRA4P83105 476 aaPredicted RBP17.65■□□□□ 0.42
NELFCD-201ENST00000460601 SLC25A11Q02978 314 aaKnown RBP17.65■□□□□ 0.42
NELFCD-201ENST00000460601 ELF2Q15723 593 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 KIAA1841Q6NSI8 718 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 RHOT1Q8IXI2 618 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 FBXO22Q8NEZ5 403 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 PEBP4Q96S96 227 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 HERPUD2Q9BSE4 406 aa17.65■□□□□ 0.42
NELFCD-201ENST00000460601 SZT2Q5T011 3432 aa17.64■□□□□ 0.41
NELFCD-201ENST00000460601 WDR27A2RRH5 827 aa17.64■□□□□ 0.41
NELFCD-201ENST00000460601 MTMR11A4FU01 709 aa17.64■□□□□ 0.41
NELFCD-201ENST00000460601 LAG3P18627 525 aa17.64■□□□□ 0.41
NELFCD-201ENST00000460601 PGFP49763 221 aa17.64■□□□□ 0.41
NELFCD-201ENST00000460601 SNX16P57768 344 aa17.64■□□□□ 0.41
NELFCD-201ENST00000460601 PSMD5Q16401 504 aa17.64■□□□□ 0.41
NELFCD-201ENST00000460601 SYPL2Q5VXT5 272 aa17.64■□□□□ 0.41
NELFCD-201ENST00000460601 RSRC2Q7L4I2 434 aaKnown RBP17.64■□□□□ 0.41
NELFCD-201ENST00000460601 BHLHA9Q7RTU4 235 aa17.64■□□□□ 0.41
NELFCD-201ENST00000460601 RASGEF1CQ8N431 466 aa17.64■□□□□ 0.41
NELFCD-201ENST00000460601 NGRNQ9NPE2 291 aaKnown RBP17.64■□□□□ 0.41
NELFCD-201ENST00000460601 SLC4A7Q9Y6M7 1214 aa17.64■□□□□ 0.41
NELFCD-201ENST00000460601 OR6C75A6NL08 312 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 EFCAB8A8MWE9 144 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 CES2O00748 559 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 SOD2P04179 222 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 FYNP06241 537 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 ATP2A2P16615 1042 aaKnown RBP17.63■□□□□ 0.41
NELFCD-201ENST00000460601 MIPP30301 263 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 OR1D2P34982 312 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 PAFAH1B1P43034 410 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 DAOAP59103 153 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 ROR1Q01973 937 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 CKAP4Q07065 602 aaKnown RBP17.63■□□□□ 0.41
NELFCD-201ENST00000460601 DCAF6Q58WW2 860 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 C9orf50Q5SZB4 431 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 ZFYVE27Q5T4F4 411 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 HERC6Q8IVU3 1022 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 ZDHHC14Q8IZN3 488 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 DEFB106AQ8N104 65 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 ACTRT1Q8TDG2 376 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 FAM172AQ8WUF8 416 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 ABHD8Q96I13 439 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 HINFPQ9BQA5 517 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 CNPY3Q9BT09 278 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 HTATIP2Q9BUP3 242 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 PLEKHA4Q9H4M7 779 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 SPG21Q9NZD8 308 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 NAALADL1Q9UQQ1 740 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 PCDHB5Q9Y5E4 795 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 PGRMC1O00264 195 aaKnown RBP17.63■□□□□ 0.41
NELFCD-201ENST00000460601 PSTPIP1O43586 416 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 ZBED1O96006 694 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 MYOGP15173 224 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 SDC4P31431 198 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 DUSP4Q13115 394 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 GPR17Q13304 367 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 NFE2Q16621 373 aaPredicted RBP17.63■□□□□ 0.41
NELFCD-201ENST00000460601 FAM109BQ6ICB4 259 aaPredicted RBP17.63■□□□□ 0.41
NELFCD-201ENST00000460601 VPS52Q8N1B4 723 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 HERVK_113Q902F9 699 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 RNF25Q96BH1 459 aaPredicted RBP17.63■□□□□ 0.41
NELFCD-201ENST00000460601 SEPT5Q99719 369 aaPredicted RBP17.63■□□□□ 0.41
NELFCD-201ENST00000460601 CLSTN3Q9BQT9 956 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 MTRRQ9UBK8 725 aa17.63■□□□□ 0.41
NELFCD-201ENST00000460601 CCDC85CA6NKD9 419 aa17.62■□□□□ 0.41
NELFCD-201ENST00000460601 TNFRSF10BO14763 440 aa17.62■□□□□ 0.41
NELFCD-201ENST00000460601 TLL1O43897 1013 aa17.62■□□□□ 0.41
NELFCD-201ENST00000460601 HDAC4P56524 1084 aa17.62■□□□□ 0.41
NELFCD-201ENST00000460601 USP46P62068 366 aa17.62■□□□□ 0.41
NELFCD-201ENST00000460601 YWHAZP63104 245 aaKnown RBP17.62■□□□□ 0.41
NELFCD-201ENST00000460601 LONRF2Q1L5Z9 754 aa17.62■□□□□ 0.41
NELFCD-201ENST00000460601 MGAT5BQ3V5L5 792 aa17.62■□□□□ 0.41
NELFCD-201ENST00000460601 CYP4V2Q6ZWL3 525 aaPredicted RBP17.62■□□□□ 0.41
NELFCD-201ENST00000460601 CCDC50Q8IVM0 306 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms