RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 SGIP1Q9BQI5 828 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 SMG5Q9UPR3 1016 aaKnown RBP18.93■□□□□ 0.62
HPS3-202ENST00000460120 PRPF4O43172 522 aaKnown RBP eCLIP18.93■□□□□ 0.62
HPS3-202ENST00000460120 TSPAN1O60635 241 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 PFKMP08237 780 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 CCDC142Q17RM4 750 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 CCDC14Q49A88 953 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 CYP4V2Q6ZWL3 525 aaPredicted RBP18.93■□□□□ 0.62
HPS3-202ENST00000460120 TDRPQ86YL5 185 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 ZNF75CPQ92670 426 aaPredicted RBP18.93■□□□□ 0.62
HPS3-202ENST00000460120 STAMBPL1Q96FJ0 436 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 NT5C1AQ9BXI3 368 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 DPEP3Q9H4B8 488 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 RSAD1Q9HA92 442 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 TUBGCP4Q9UGJ1 667 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 CHKBQ9Y259 395 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 IKBKGQ9Y6K9 419 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 PTPRFP10586 1907 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 C2CD4BA6NLJ0 364 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 ADORA2AP29274 412 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 ADORA2BP29275 332 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 SLC26A2P50443 739 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 TNFAIP2Q03169 654 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 PDK4Q16654 411 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 OTOAQ7RTW8 1153 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 PRPF39Q86UA1 669 aaKnown RBP18.92■□□□□ 0.62
HPS3-202ENST00000460120 CCDC110Q8TBZ0 833 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 TTC17Q96AE7 1141 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 CNPY3Q9BT09 278 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 SLC24A2Q9UI40 661 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 PPME1Q9Y570 386 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 CBX6O95503 412 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 APRTP07741 180 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 GJA5P36382 358 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 RBP5P82980 135 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 FAAP100Q0VG06 881 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 PTK7Q13308 1070 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 MOGSQ13724 837 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 SETDB1Q15047 1291 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 SWT1Q5T5J6 900 aaKnown RBP18.92■□□□□ 0.62
HPS3-202ENST00000460120 TTC30AQ86WT1 665 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 OR6B3Q8NGW1 331 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 DCAKDQ8WVC6 231 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 ACSS3Q9H6R3 686 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 SETD4Q9NVD3 440 aa18.92■□□□□ 0.62
HPS3-202ENST00000460120 SYNJ2BP-COX16A0A087WUM0 186 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 TCRBV9S1A1TA0A576 114 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 H3BRB1 525 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 CXCL11O14625 94 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 MT-ND3P03897 115 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 MTHFD1LQ6UB35 978 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 AGGF1Q8N302 714 aaeCLIP18.91■□□□□ 0.621e-8■■■□□ 15.4
HPS3-202ENST00000460120 PPM1NQ8N819 430 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 AGAP11Q8TF27 550 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 SERAC1Q96JX3 654 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 ZMAT2Q96NC0 199 aaKnown RBP18.91■□□□□ 0.62
HPS3-202ENST00000460120 TACO1Q9BSH4 297 aaKnown RBP18.91■□□□□ 0.62
HPS3-202ENST00000460120 EIF2AQ9BY44 585 aaKnown RBP18.91■□□□□ 0.62
HPS3-202ENST00000460120 MAF1Q9H063 256 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 TUT1Q9H6E5 874 aaKnown RBP18.91■□□□□ 0.62
HPS3-202ENST00000460120 PIH1D1Q9NWS0 290 aaKnown RBP18.91■□□□□ 0.62
HPS3-202ENST00000460120 KLK14Q9P0G3 267 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 COX16Q9P0S2 106 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 LOC102724159A0A0B4J2E5 919 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 CFAP73A6NFT4 308 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 C2orf71A6NGG8 1288 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 EDF1O60869 148 aaKnown RBP18.91■□□□□ 0.62
HPS3-202ENST00000460120 MYCNP04198 464 aaPredicted RBP18.91■□□□□ 0.62
HPS3-202ENST00000460120 LCP1P13796 627 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 PWP2Q15269 919 aaKnown RBP18.91■□□□□ 0.62
HPS3-202ENST00000460120 ZNF484Q5JVG2 852 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 TAPT1Q6NXT6 567 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 PTPRN2Q92932 1015 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 LRRC37BQ96QE4 947 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 NME7Q9Y5B8 376 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 LOC285556D6RIA3 1793 aa18.91■□□□□ 0.62
HPS3-202ENST00000460120 A0A0G2JND7 137 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 AKAP5P24588 427 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 BCAR1P56945 870 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 NOMO1Q15155 1222 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 KLHL38Q2WGJ6 581 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 RNF43Q68DV7 783 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 LRRC6Q86X45 466 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 GBP7Q8N8V2 638 aaPredicted RBP18.9■□□□□ 0.62
HPS3-202ENST00000460120 FAM111AQ96PZ2 611 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 CDHR5Q9HBB8 845 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 ZBED1O96006 694 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 PYGBP11216 843 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 CCDC130P13994 396 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 PSEN1P49768 467 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 PLD5Q8N7P1 536 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 RFWD2Q8NHY2 731 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 NDRG1Q92597 394 aaKnown RBP18.9■□□□□ 0.62
HPS3-202ENST00000460120 RNF157Q96PX1 679 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 SNRNP25Q9BV90 132 aaKnown RBP18.9■□□□□ 0.62
HPS3-202ENST00000460120 MROH8Q9H579 483 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 ASB7Q9H672 318 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 EFR3BQ9Y2G0 817 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 STARD13Q9Y3M8 1113 aa18.9■□□□□ 0.62
HPS3-202ENST00000460120 ASB14A6NK59 587 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms