RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 SEPT12Q8IYM1 358 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 TLR7Q9NYK1 1049 aaKnown RBP9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 KLHL3Q9UH77 587 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 OPLAHO14841 1288 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 FCGRTP55899 365 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 CHRNB3Q05901 458 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 PDK2Q15119 407 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 ATF7IP2Q5U623 682 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 CENPTQ96BT3 561 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 NIF3L1Q9GZT8 377 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 DDX47Q9H0S4 455 aaKnown RBP9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 PIH1D3Q9NQM4 214 aaKnown RBP9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 KCND1Q9NSA2 647 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 SNX9Q9Y5X1 595 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 PNPLA6Q8IY17 1366 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 LMTK2Q8IWU2 1503 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 C17orf102A2RUQ5 167 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 MGAT4DA6NG13 374 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 ATAD3BQ5T9A4 648 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 HMG20AQ9NP66 347 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 AFF2P51816 1311 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 E9PBE3 544 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 CNOT3O75175 753 aaKnown RBP9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 PABPC1P11940 636 aaKnown RBP9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 FMO5P49326 533 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 TAF6P49848 677 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 RPL10AP62906 217 aaKnown RBP9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 MTMR2Q13614 643 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 ALFQ53S48 1182 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 GTF2A1LQ9UNN4 478 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 TMEM114B3SHH9 223 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 NCAM2O15394 837 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 KLHL41O60662 606 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 KRT6AP02538 564 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 KRT6BP04259 564 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 KRT6CP48668 564 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 IPMKQ8NFU5 416 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 ERGIC2Q96RQ1 377 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 CLPBQ9H078 707 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 LY9Q9HBG7 655 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 PPIL2Q13356 520 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 PLCL1Q15111 1095 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 TXNRD1Q16881 649 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 QRICH1Q2TAL8 776 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 GOLGA7BQ2TAP0 167 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 BRINP3Q76B58 766 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 MCOLN3Q8TDD5 553 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 C7orf25Q9BPX7 421 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 WHRNQ9P202 907 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 CRYL1Q9Y2S2 319 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 RBP1P09455 135 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 PTPN3P26045 913 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 CACNB2Q08289 660 aaPredicted RBP9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 PCSK7Q16549 785 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 C11orf96Q7Z7L8 435 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 DNAJC9Q8WXX5 260 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 SPRTNQ9H040 489 aaPredicted RBP9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 GPR182O15218 404 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 PRR29P0C7W0 189 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 STAT5AP42229 794 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 NPY2RP49146 381 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 ARMC3Q5W041 872 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 HLA-DQA1Q5Y7H0 255 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 KDM7AQ6ZMT4 941 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 COL23A1Q86Y22 540 aaPredicted RBP9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 LRRC49Q8IUZ0 686 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 BSNDQ8WZ55 320 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 NSL1Q96IY1 281 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 SENP2Q9HC62 589 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 PCDHB2Q9Y5E7 798 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 TBKBP1A7MCY6 615 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 CDC25AP30304 524 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 TGFBR2P37173 567 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 PRKAA1Q13131 559 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 ZNF211Q13398 564 aaPredicted RBP9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 TRIQKQ629K1 86 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 GPRC5AQ8NFJ5 357 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 IL17RAQ96F46 866 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 PPP1R36Q96LQ0 422 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 KNTC1P50748 2209 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 MAGEA13PA6NCF6 341 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 PIK3CDO00329 1044 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 RAB15P59190 212 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 PEX6Q13608 980 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 MGAT5BQ3V5L5 792 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 BOLA3Q53S33 107 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 ANKMY2Q8IV38 441 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 RBBP8NLQ8NC74 664 aaPredicted RBP9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 SLC35G2Q8TBE7 412 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 KLHL25Q9H0H3 589 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 ISCUQ9H1K1 167 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 RAD18Q9NS91 495 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 KIAA1257Q9ULG3 409 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 MAPRE3Q9UPY8 281 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 TRIM49BA6NDI0 452 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 ANKRD65E5RJM6 399 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 AREL1O15033 823 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 SASH1O94885 1247 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms