RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 PNPLA4P41247 253 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 BST2Q10589 180 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 TTMPQ5BVD1 217 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 CTAGE3PQ8IX95 158 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 BCAS4Q8TDM0 211 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 CAVIN3Q969G5 261 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 SENP6Q9GZR1 1112 aaPredicted RBP9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 LHX5Q9H2C1 402 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 SLC38A7Q9NVC3 462 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 DDX56Q9NY93 547 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 MAD1L1Q9Y6D9 718 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 NDUFAB1O14561 156 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 CAND2O75155 1236 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 NEBLO76041 1014 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 BEST1O76090 585 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 KDELR1P24390 212 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 PTGIRP43119 386 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 FNTAP49354 379 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 SLC6A3Q01959 620 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 PDIA2Q13087 525 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 LRRC14Q15048 493 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 RWDD4Q6NW29 188 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 NT5DC4Q86YG4 428 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 LRRC52Q8N7C0 313 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 USP6NLQ92738 828 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 ULBP1Q9BZM6 244 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 CNTN6Q9UQ52 1028 aa9.78□□□□□ -0.84
NUDCD3-203ENST00000460110 DCDC2CA8MYV0 355 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 KBTBD13C9JR72 458 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 HAS3O00219 553 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 KIF3CO14782 793 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 MGEA5O60502 916 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 TADA2AO75478 443 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 KRT15P19012 456 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 TKTP29401 623 aaKnown RBP9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 ARL4AP40617 200 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 TM4SF4P48230 202 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 PITX1P78337 314 aaPredicted RBP9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 ENPEPQ07075 957 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 CA9Q16790 459 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 TIGD5Q53EQ6 642 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 PALM2Q8IXS6 379 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 PYROXD2Q8N2H3 581 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 TTC39CQ8N584 583 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 DDX20Q9UHI6 824 aaKnown RBP9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 KIAA1257Q9ULG3 409 aa9.77□□□□□ -0.84
NUDCD3-203ENST00000460110 PECAM1P16284 738 aaPredicted RBP9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 AMPD1P23109 780 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 SEC24CP53992 1094 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 CCNG2Q16589 344 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 ZSCAN26Q16670 478 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 AGMOQ6ZNB7 445 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 FAF2Q96CS3 445 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 ATP6V1G3Q96LB4 118 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 CDC42EP4Q9H3Q1 356 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 RAB6BQ9NRW1 208 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 HOMER3Q9NSC5 361 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 NEU2Q9Y3R4 380 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 hCG_1818297A0A087WSY0 165 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 APRTP07741 180 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 GRK4P32298 578 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 MAN1A1P33908 653 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 ZNF143P52747 638 aaPredicted RBP9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 YWHAGP61981 247 aaKnown RBP eCLIP9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 ZNF844Q08AG5 666 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 TMED2Q15363 201 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 STILQ15468 1287 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 SEPT7Q16181 437 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 IQCKQ8N0W5 287 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 ANKRD52Q8NB46 1076 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 C3orf58Q8NDZ4 430 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 SCLYQ96I15 445 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 CCDC77Q9BR77 488 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 SNRNP25Q9BV90 132 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 LRRC4CQ9HCJ2 640 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 DDIT4Q9NX09 232 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 CNTN3Q9P232 1028 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 PCYOX1Q9UHG3 505 aa9.77□□□□□ -0.85
NUDCD3-203ENST00000460110 HSPA9P38646 679 aaKnown RBP9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 DEUP1Q05D60 604 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 OVOS1Q6IE37 1185 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 SERINC5Q86VE9 423 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 CCDC13Q8IYE1 715 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 UBR7Q8N806 425 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 AGAP3Q96P47 875 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 TBCBQ99426 244 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 LRRC19Q9H756 370 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 CTNNAL1Q9UBT7 734 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 NME7Q9Y5B8 376 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 SCN1AP35498 2009 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 CCDC78A2IDD5 438 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 TRUB2O95900 331 aaKnown RBP9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 ITGB1P05556 798 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 HMBSP08397 361 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 VIMP08670 466 aaKnown RBP9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 CDKN2BP42772 138 aa9.76□□□□□ -0.85
NUDCD3-203ENST00000460110 CCT5P48643 541 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms