RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 FAM186AA6NE01 2351 aa16.53■□□□□ 0.24
SDF4-204ENST00000459994 A0A1W2PQJ5 194 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 OTOL1A6NHN0 477 aaPredicted RBP16.52■□□□□ 0.24
SDF4-204ENST00000459994 EPHB6O15197 1021 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 FGF19O95750 216 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 BDNFP23560 247 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 ASPAP45381 313 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 RAP1GAPP47736 663 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 MFAP3P55082 362 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 POLR2FP61218 127 aaKnown RBP16.52■□□□□ 0.24
SDF4-204ENST00000459994 USP46P62068 366 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 CSTF1Q05048 431 aaKnown RBP16.52■□□□□ 0.24
SDF4-204ENST00000459994 TBX2Q13207 712 aaPredicted RBP16.52■□□□□ 0.24
SDF4-204ENST00000459994 CFAP221Q4G0U5 840 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 TRIM68Q6AZZ1 485 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 TMC6Q7Z403 805 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 YAF2Q8IY57 180 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 PPM1KQ8N3J5 372 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 TTC39CQ8N584 583 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 SPATA18Q8TC71 538 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 BPIFB1Q8TDL5 484 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 USP13Q92995 863 aaPredicted RBP16.52■□□□□ 0.24
SDF4-204ENST00000459994 CHFRQ96EP1 664 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 KREMEN1Q96MU8 473 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 STK33Q9BYT3 514 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 SDCBP2Q9H190 292 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 SMYD3Q9H7B4 428 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 ABCB6Q9NP58 842 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.52■□□□□ 0.24
SDF4-204ENST00000459994 C2orf42Q9NWW7 574 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 CDH9Q9ULB4 789 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 FHOD1Q9Y613 1164 aa16.52■□□□□ 0.24
SDF4-204ENST00000459994 DPYSL4O14531 572 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 LAMTOR5O43504 91 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 TACC1O75410 805 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 CLSTN1O94985 981 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 CSH1P0DML2 217 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 CSH2P0DML3 217 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 CHRNB1P11230 501 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 PCSK1P29120 753 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 WEE1P30291 646 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 RPS9P46781 194 aaKnown RBP16.51■□□□□ 0.23
SDF4-204ENST00000459994 CDH8P55286 799 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 YWHAEP62258 255 aaKnown RBP16.51■□□□□ 0.23
SDF4-204ENST00000459994 MDH1BQ5I0G3 518 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 GJB7Q6PEY0 223 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 RRAGAQ7L523 313 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 UBR7Q8N806 425 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 CSGALNACT1Q8TDX6 532 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 E2F7Q96AV8 911 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 PCED1BQ96HM7 432 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 GCNAQ96QF7 691 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 CYP2S1Q96SQ9 504 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 LMAN1LQ9HAT1 526 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 HPS4Q9NQG7 708 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 OBP2AQ9NY56 170 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 MYO6Q9UM54 1294 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 CAPN11Q9UMQ6 739 aa16.51■□□□□ 0.23
SDF4-204ENST00000459994 RIF1Q5UIP0 2472 aaKnown RBP16.5■□□□□ 0.23
SDF4-204ENST00000459994 C2orf78A6NCI8 922 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 SPECC1L-ADORA2AF8WAN1 911 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 CLDN5O00501 218 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 GYPCP04921 128 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 TPM1P09493 284 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 TDGF1P13385 188 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 CTHP32929 405 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 RPL10AP62906 217 aaKnown RBP16.5■□□□□ 0.23
SDF4-204ENST00000459994 CYP27A1Q02318 531 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 PON2Q15165 354 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 ARHGAP29Q52LW3 1261 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 NAIF1Q69YI7 327 aaPredicted RBP16.5■□□□□ 0.23
SDF4-204ENST00000459994 Q6ZS52 159 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 CACNA2D4Q7Z3S7 1137 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 DRC7Q8IY82 874 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 OR6B3Q8NGW1 331 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 SHC3Q92529 594 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 BAP1Q92560 729 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 KAT5Q92993 513 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 TRMT2BQ96GJ1 504 aaKnown RBP16.5■□□□□ 0.23
SDF4-204ENST00000459994 MYRFLQ96LU7 910 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 NELL2Q99435 816 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 CHRDQ9H2X0 955 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 NLRC4Q9NPP4 1024 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 PRMT8Q9NR22 394 aaPredicted RBP16.5■□□□□ 0.23
SDF4-204ENST00000459994 GKN1Q9NS71 199 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 IMPACTQ9P2X3 320 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 AJAP1Q9UKB5 411 aaPredicted RBP16.5■□□□□ 0.23
SDF4-204ENST00000459994 CNTN6Q9UQ52 1028 aa16.5■□□□□ 0.23
SDF4-204ENST00000459994 MAN2B1O00754 1011 aa16.49■□□□□ 0.23
SDF4-204ENST00000459994 ARSAP15289 507 aa16.49■□□□□ 0.23
SDF4-204ENST00000459994 ACO1P21399 889 aaKnown RBP16.49■□□□□ 0.23
SDF4-204ENST00000459994 GNL1P36915 607 aaPredicted RBP16.49■□□□□ 0.23
SDF4-204ENST00000459994 MAGEA11P43364 429 aa16.49■□□□□ 0.23
SDF4-204ENST00000459994 KPNA1P52294 538 aaPredicted RBP16.49■□□□□ 0.23
SDF4-204ENST00000459994 JAM2P57087 298 aa16.49■□□□□ 0.23
SDF4-204ENST00000459994 ZBED6P86452 979 aa16.49■□□□□ 0.23
SDF4-204ENST00000459994 ZXDBP98169 803 aa16.49■□□□□ 0.23
SDF4-204ENST00000459994 INCA1Q0VD86 236 aa16.49■□□□□ 0.23
SDF4-204ENST00000459994 DRAP1Q14919 205 aaPredicted RBP16.49■□□□□ 0.23
SDF4-204ENST00000459994 SCARA5Q6ZMJ2 495 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms