RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 CYP8B1Q9UNU6 501 aa8.43□□□□□ -1.06
HPS4-207ENST00000459918 APOBEC2Q9Y235 224 aaKnown RBP8.43□□□□□ -1.06
HPS4-207ENST00000459918 GPSM3Q9Y4H4 160 aa8.43□□□□□ -1.06
HPS4-207ENST00000459918 PCDH15Q96QU1 1955 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 GOLGA8IPA6NC78 632 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 GOLGA8JA6NMD2 632 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 GOLGA8CPA6NN73 597 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 UPK3BL1B0FP48 263 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 UPK3BL2E5RIL1 263 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 SH3BP5O60239 455 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 ZNF217O75362 1048 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 GCNT3O95395 438 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 ZIC2O95409 532 aaPredicted RBP8.42□□□□□ -1.06
HPS4-207ENST00000459918 TNNC2P02585 160 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 NEFLP07196 543 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 PDGFRBP09619 1106 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 IRF1P10914 325 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 TCF3P15923 654 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 PFKLP17858 780 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 EIF2DP41214 584 aaKnown RBP8.42□□□□□ -1.06
HPS4-207ENST00000459918 MAGEA11P43364 429 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 TNFRSF4P43489 277 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 PPP3CCP48454 512 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 ZNF131P52739 623 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 RBP5P82980 135 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 GAD2Q05329 585 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 LY6G5CQ5SRR4 150 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 TDRD10Q5VZ19 366 aaKnown RBP8.42□□□□□ -1.06
HPS4-207ENST00000459918 VSTM1Q6UX27 236 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 KIAA1324Q6UXG2 1013 aaKnown RBP8.42□□□□□ -1.06
HPS4-207ENST00000459918 DYMQ7RTS9 669 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 RAB44Q7Z6P3 723 aaPredicted RBP8.42□□□□□ -1.06
HPS4-207ENST00000459918 OSTM1Q86WC4 334 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 C12orf40Q86WS4 652 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 SFR1Q86XK3 245 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 LRRC52Q8N7C0 313 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 C1orf127Q8N9H9 656 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 LRRC15Q8TF66 581 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 ANKRD36BP1Q96IX9 119 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 ZSCAN31Q96LW9 406 aaPredicted RBP8.42□□□□□ -1.06
HPS4-207ENST00000459918 AK8Q96MA6 479 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 MTMR12Q9C0I1 747 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 MIR1-1HGQ9H1L0 117 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 IKZF4Q9H2S9 585 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 SNX25Q9H3E2 840 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 FAM124BQ9H5Z6 455 aaPredicted RBP8.42□□□□□ -1.06
HPS4-207ENST00000459918 TBC1D7Q9P0N9 293 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 TBC1D14Q9P2M4 693 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 DEC1Q9P2X7 70 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 RAXQ9Y2V3 346 aa8.42□□□□□ -1.06
HPS4-207ENST00000459918 CACNA1EQ15878 2313 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 MYH10P35580 1976 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 A0A1W2PQD8 194 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 F8VP50 259 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 ADAM23O75077 832 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 ATP2C2O75185 946 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 LDHAP00338 332 aaKnown RBP8.41□□□□□ -1.06
HPS4-207ENST00000459918 GABRG2P18507 467 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 KIR2DL1P43626 348 aaPredicted RBP8.41□□□□□ -1.06
HPS4-207ENST00000459918 USP46P62068 366 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 SLC7A9P82251 487 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 SLC14A1Q13336 389 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 SOWAHCQ53LP3 525 aaPredicted RBP8.41□□□□□ -1.06
HPS4-207ENST00000459918 CCDC157Q569K6 752 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 MDH1BQ5I0G3 518 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 WDR45BQ5MNZ6 344 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 PEAR1Q5VY43 1037 aaPredicted RBP8.41□□□□□ -1.06
HPS4-207ENST00000459918 ARL6IP4Q66PJ3 421 aaKnown RBP8.41□□□□□ -1.06
HPS4-207ENST00000459918 BRSK2Q8IWQ3 736 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 ADGRG2Q8IZP9 1017 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 SCFD1Q8WVM8 642 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 LARP4BQ92615 738 aaKnown RBP8.41□□□□□ -1.06
HPS4-207ENST00000459918 RAD54LQ92698 747 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 COL26A1Q96A83 441 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 HVCN1Q96D96 273 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 HPDLQ96IR7 371 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 FAM84AQ96KN4 292 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 SPATA17Q96L03 361 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 ACCSQ96QU6 501 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 CAPN10Q9HC96 672 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 PPP4R2Q9NY27 417 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 CDH9Q9ULB4 789 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 LAMA5O15230 3695 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 PCNX2A6NKB5 2137 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 PTPRBP23467 1997 aa8.41□□□□□ -1.06
HPS4-207ENST00000459918 IGHV1OR15-9A0A0B4J2B8 117 aa8.4□□□□□ -1.06
HPS4-207ENST00000459918 ZNF840PA6NDX5 716 aa8.4□□□□□ -1.06
HPS4-207ENST00000459918 NEDD8-MDP1E9PL57 170 aa8.4□□□□□ -1.06
HPS4-207ENST00000459918 SLC26A4O43511 780 aa8.4□□□□□ -1.06
HPS4-207ENST00000459918 TULP3O75386 442 aa8.4□□□□□ -1.06
HPS4-207ENST00000459918 PRPF6O94906 941 aaKnown RBP8.4□□□□□ -1.06
HPS4-207ENST00000459918 CD59P13987 128 aa8.4□□□□□ -1.06
HPS4-207ENST00000459918 IDEP14735 1019 aa8.4□□□□□ -1.06
HPS4-207ENST00000459918 MAOBP27338 520 aa8.4□□□□□ -1.06
HPS4-207ENST00000459918 NTSR1P30989 418 aa8.4□□□□□ -1.06
HPS4-207ENST00000459918 TXLNAP40222 546 aa8.4□□□□□ -1.06
HPS4-207ENST00000459918 TNNC1P63316 161 aa8.4□□□□□ -1.06
HPS4-207ENST00000459918 ZXDBP98169 803 aa8.4□□□□□ -1.06
HPS4-207ENST00000459918 POU5F1Q01860 360 aaKnown RBP8.4□□□□□ -1.06
HPS4-207ENST00000459918 MESP2Q0VG99 397 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms