RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 MARK2Q7KZI7 788 aaKnown RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 DDIASQ8IXT1 998 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 SOCS4Q8WXH5 440 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 POP5Q969H6 163 aaKnown RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 RNF25Q96BH1 459 aaPredicted RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 ANO3Q9BYT9 981 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 RIOX1Q9H6W3 641 aa10.12□□□□□ -0.79
UFD1-205ENST00000459854 R3HDM2Q9Y2K5 976 aaKnown RBP10.12□□□□□ -0.79
UFD1-205ENST00000459854 WEE2P0C1S8 567 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 ATP6V1C1P21283 382 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 ITGA1P56199 1179 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 ERVK-9P63128 1117 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 ERVK-24P63145 666 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 UBXN2AP68543 259 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 FMR1Q06787 632 aaKnown RBP eCLIP10.11□□□□□ -0.79
UFD1-205ENST00000459854 C19orf18Q8NEA5 215 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 AGBL1Q96MI9 1066 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 DEPDC7Q96QD5 511 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 ANKZF1Q9H8Y5 726 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 KLHL3Q9UH77 587 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 EVPLLA8MZ36 301 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 PSTPIP1O43586 416 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 SP3Q02447 781 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 STILQ15468 1287 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 OR2W6PQ8NHA6 318 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 OSCP1Q8WVF1 389 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 ILKAPQ9H0C8 392 aaPredicted RBP10.11□□□□□ -0.79
UFD1-205ENST00000459854 PCIF1Q9H4Z3 704 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 ENOPH1Q9UHY7 261 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 TRAPPC3O43617 180 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 FKTNO75072 461 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 PSAPP07602 524 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 KCNA2P16389 499 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 EIF2AK2P19525 551 aaKnown RBP10.11□□□□□ -0.79
UFD1-205ENST00000459854 HOXA13P31271 388 aaPredicted RBP10.11□□□□□ -0.79
UFD1-205ENST00000459854 EIF3EP60228 445 aaKnown RBP10.11□□□□□ -0.79
UFD1-205ENST00000459854 KYAT1Q16773 422 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 CWF19L1Q69YN2 538 aaKnown RBP10.11□□□□□ -0.79
UFD1-205ENST00000459854 ANGPTL8Q6UXH0 198 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 GLYCTKQ8IVS8 523 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 SETD9Q8NE22 299 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 FNIP1Q8TF40 1166 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 ATP8B4Q8TF62 1192 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 VPS50Q96JG6 964 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 BHMT2Q9H2M3 363 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 SMARCAL1Q9NZC9 954 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 CNTNAP5Q8WYK1 1306 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 RXRGP48443 463 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 GALCP54803 685 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 TRIP4Q15650 581 aaPredicted RBP10.11□□□□□ -0.79
UFD1-205ENST00000459854 C4orf33Q8N1A6 199 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 GIMAP8Q8ND71 665 aaPredicted RBP10.11□□□□□ -0.79
UFD1-205ENST00000459854 MS4A14Q96JA4 679 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 HEXIM2Q96MH2 286 aaKnown RBP10.11□□□□□ -0.79
UFD1-205ENST00000459854 STOML2Q9UJZ1 356 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 PCDHA6Q9UN73 950 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 PRG3Q9Y2Y8 225 aaPredicted RBP10.11□□□□□ -0.79
UFD1-205ENST00000459854 PCDHA8Q9Y5H6 950 aa10.11□□□□□ -0.79
UFD1-205ENST00000459854 KATNA1O75449 491 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 ABCB1P08183 1280 aaPredicted RBP10.1□□□□□ -0.79
UFD1-205ENST00000459854 SLC9A1P19634 815 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 CHN2P52757 468 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 CCDC153Q494R4 210 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 KCNV1Q6PIU1 500 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 IFNL1Q8IU54 200 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 DGCR14Q96DF8 476 aaKnown RBP10.1□□□□□ -0.79
UFD1-205ENST00000459854 MKNK1Q9BUB5 465 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 EXOSC4Q9NPD3 245 aaKnown RBP10.1□□□□□ -0.79
UFD1-205ENST00000459854 H0YC42 278 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 PHGDHO43175 533 aaKnown RBP10.1□□□□□ -0.79
UFD1-205ENST00000459854 ARPC4P59998 168 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 DNAJC3Q13217 504 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 BAATQ14032 418 aaPredicted RBP10.1□□□□□ -0.79
UFD1-205ENST00000459854 CCDC142Q17RM4 750 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 FAM110CQ1W6H9 321 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 XRRA1Q6P2D8 792 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 TSHZ1Q6ZSZ6 1077 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.1□□□□□ -0.79
UFD1-205ENST00000459854 SHCBP1Q8NEM2 672 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 PPHLN1Q8NEY8 458 aaKnown RBP10.1□□□□□ -0.79
UFD1-205ENST00000459854 FAM162AQ96A26 154 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 SENP7Q9BQF6 1050 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 RPF1Q9H9Y2 349 aaKnown RBP10.1□□□□□ -0.79
UFD1-205ENST00000459854 KCND2Q9NZV8 630 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 SEPT9Q9UHD8 586 aaPredicted RBP10.1□□□□□ -0.79
UFD1-205ENST00000459854 PLAGL2Q9UPG8 496 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 ZNF197O14709 1029 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 CNOT3O75175 753 aaKnown RBP10.1□□□□□ -0.79
UFD1-205ENST00000459854 RECQLP46063 649 aaPredicted RBP10.1□□□□□ -0.79
UFD1-205ENST00000459854 ITGA8P53708 1063 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 DLG4P78352 724 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 POU5F1BQ06416 359 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 ITGB3BPQ13352 177 aaPredicted RBP10.1□□□□□ -0.79
UFD1-205ENST00000459854 UBE2SQ16763 222 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 TREML2Q5T2D2 321 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 FAM45BPQ6NSW5 357 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 RIOX2Q8IUF8 465 aa10.1□□□□□ -0.79
UFD1-205ENST00000459854 AENQ8WTP8 325 aaKnown RBP10.1□□□□□ -0.79
UFD1-205ENST00000459854 PDCD6IPQ8WUM4 868 aaKnown RBP10.1□□□□□ -0.79
UFD1-205ENST00000459854 CEP170P1Q96L14 293 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms