RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 OTUD4Q01804 1114 aaKnown RBP8.87□□□□□ -0.99
VPS50-208ENST00000458707 PLCB3Q01970 1234 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 SLC25A11Q02978 314 aaKnown RBP8.87□□□□□ -0.99
VPS50-208ENST00000458707 ZBTB16Q05516 673 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 PTK7Q13308 1070 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 ZFYVE27Q5T4F4 411 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 DNAJC24Q6P3W2 148 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 ZC3H18Q86VM9 953 aaKnown RBP8.87□□□□□ -0.99
VPS50-208ENST00000458707 TMPRSS6Q8IU80 811 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 SCYL3Q8IZE3 742 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 PDIK1LQ8N165 341 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 HAUS1Q96CS2 278 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 DTNBP1Q96EV8 351 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 SERAC1Q96JX3 654 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 CEP170P1Q96L14 293 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 C7orf26Q96N11 449 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 PNPLA8Q9NP80 782 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 SPATA7Q9P0W8 599 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 ANGPTL2Q9UKU9 493 aa8.87□□□□□ -0.99
VPS50-208ENST00000458707 AGO2Q9UKV8 859 aaKnown RBP8.87□□□□□ -0.99
VPS50-208ENST00000458707 BRWD3Q6RI45 1802 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.86□□□□□ -0.99
VPS50-208ENST00000458707 SPAG6O75602 509 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 LDHAP00338 332 aaKnown RBP8.86□□□□□ -0.99
VPS50-208ENST00000458707 MYL2P10916 166 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 EIF2AK2P19525 551 aaKnown RBP8.86□□□□□ -0.99
VPS50-208ENST00000458707 BGNP21810 368 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 PGM1P36871 562 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 SERPINB4P48594 390 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 THOC5Q13769 683 aaKnown RBP8.86□□□□□ -0.99
VPS50-208ENST00000458707 ZYXQ15942 572 aaKnown RBP8.86□□□□□ -0.99
VPS50-208ENST00000458707 TRMT5Q32P41 509 aaKnown RBP8.86□□□□□ -0.99
VPS50-208ENST00000458707 XRRA1Q6P2D8 792 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 DCUN1D2Q6PH85 259 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 ARHGAP22Q7Z5H3 698 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 TTC7BQ86TV6 843 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 KBTBD2Q8IY47 623 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 THNSL1Q8IYQ7 743 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 CCDC110Q8TBZ0 833 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 ATP6V0A1Q93050 837 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 AZIN2Q96A70 460 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 FAM111AQ96PZ2 611 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 KLF6Q99612 283 aaPredicted RBP8.86□□□□□ -0.99
VPS50-208ENST00000458707 PDCD2LQ9BRP1 358 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 NMUR2Q9GZQ4 415 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 HAPLN2Q9GZV7 340 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 PXMP2Q9NR77 195 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 MKS1Q9NXB0 559 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 TMOD2Q9NZR1 351 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 TCEAL9Q9UHQ7 104 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 PCDHGC3Q9UN70 934 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 PLA2G4CQ9UP65 541 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 TEX264Q9Y6I9 313 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 CNTNAP2Q9UHC6 1331 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 PHIPQ8WWQ0 1821 aa8.86□□□□□ -0.99
VPS50-208ENST00000458707 TCRBV7S3A2A0A539 114 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 TCRBV9S1A1TA0A576 114 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 TESPA1A2RU30 521 aaPredicted RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 TCP10L2B9ZVM9 353 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 E2F6O75461 281 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 TM7SF2O76062 418 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 C1QAP02745 245 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 KRT7P08729 469 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 AMPD1P23109 780 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 EIF4BP23588 611 aaKnown RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 KDELR1P24390 212 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 CRABP2P29373 138 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 ACOT2P49753 483 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 ACTR3P61158 418 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 RPS6P62753 249 aaKnown RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 ZNF200P98182 395 aaPredicted RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 TBCCQ15814 346 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 HSF5Q4G112 596 aaPredicted RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 SLFN12LQ6IEE8 588 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 TRMT1LQ7Z2T5 733 aaKnown RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 WDTC1Q8N5D0 677 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 TMEM35BQ8NCS4 154 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 DTX3LQ8TDB6 740 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 FNIP1Q8TF40 1166 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 RSAD2Q8WXG1 361 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 APBB2Q92870 758 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 FGD4Q96M96 766 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 EPAS1Q99814 870 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 GLIS2Q9BZE0 524 aaPredicted RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 POLR3FQ9H1D9 316 aaPredicted RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 C1orf21Q9H246 121 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 SLC38A10Q9HBR0 1119 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 GPAMQ9HCL2 828 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 ALG13Q9NP73 1137 aaKnown RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 METTL5Q9NRN9 209 aaKnown RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 RBAKQ9NYW8 714 aaPredicted RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 GABBR1Q9UBS5 961 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 XPO7Q9UIA9 1087 aaKnown RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 BARX2Q9UMQ3 279 aaPredicted RBP8.85□□□□□ -0.99
VPS50-208ENST00000458707 WASF2Q9Y6W5 498 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 ADGRA2Q96PE1 1338 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 SSC5DA1L4H1 1573 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 FAM237BA0A1B0GVD1 139 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 B2RBV5 119 aa8.85□□□□□ -0.99
VPS50-208ENST00000458707 E5RJQ4 531 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms