RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 SLC40A1Q9NP59 571 aa12.14□□□□□ -0.47
SMARCAD1-204ENST00000457823 TSPAN16Q9UKR8 245 aa12.14□□□□□ -0.47
SMARCAD1-204ENST00000457823 AAR2Q9Y312 384 aaKnown RBP12.14□□□□□ -0.47
SMARCAD1-204ENST00000457823 TISP43B9A030 160 aa12.14□□□□□ -0.47
SMARCAD1-204ENST00000457823 CKMP06732 381 aa12.14□□□□□ -0.47
SMARCAD1-204ENST00000457823 AVPR1AP37288 418 aa12.14□□□□□ -0.47
SMARCAD1-204ENST00000457823 PPP3CCP48454 512 aa12.14□□□□□ -0.47
SMARCAD1-204ENST00000457823 TKTL1P51854 596 aa12.14□□□□□ -0.47
SMARCAD1-204ENST00000457823 PPATQ06203 517 aa12.14□□□□□ -0.47
SMARCAD1-204ENST00000457823 KCNMA1Q12791 1236 aa12.14□□□□□ -0.47
SMARCAD1-204ENST00000457823 EFEMP1Q12805 493 aa12.14□□□□□ -0.47
SMARCAD1-204ENST00000457823 AGAP9Q5VTM2 703 aa12.14□□□□□ -0.47
SMARCAD1-204ENST00000457823 PPP4R4Q6NUP7 873 aa12.14□□□□□ -0.47
SMARCAD1-204ENST00000457823 REPS2Q8NFH8 660 aa12.14□□□□□ -0.47
SMARCAD1-204ENST00000457823 CASTOR2A6NHX0 329 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 GLRA3O75311 464 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 SOAT2O75908 522 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 SRP72O76094 671 aaKnown RBP12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 AKAP5P24588 427 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 GCNT1Q02742 428 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 TBX2Q13207 712 aaPredicted RBP12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 KRT72Q14CN4 511 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 CTXN3Q4LDR2 81 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 SLC26A11Q86WA9 606 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 SNX31Q8N9S9 440 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 INPP5DQ92835 1189 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 MTMR9Q96QG7 549 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 A1CFQ9NQ94 594 aaKnown RBP12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 MRGBPQ9NV56 204 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 RIC8BQ9NVN3 520 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 ARHGAP26Q9UNA1 814 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 SLIT1O75093 1534 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 C5orf58C9J3I9 102 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 H3BQF6 201 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 TPST1O60507 370 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 CLASP2O75122 1294 aaKnown RBP12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 ASS1P00966 412 aaKnown RBP12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 ACAT1P24752 427 aaKnown RBP12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 RHBDL3P58872 404 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 FLOT2Q14254 428 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 PKN3Q6P5Z2 889 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 SH3RF1Q7Z6J0 888 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 SETD3Q86TU7 594 aaPredicted RBP12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 DNAJB3Q8WWF6 145 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 DNAJC9Q8WXX5 260 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 TMEM161AQ9NX61 479 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 BARX2Q9UMQ3 279 aaPredicted RBP12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 FZD1Q9UP38 647 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 HEATR9A2RTY3 570 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 C2orf81A6NN90 581 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 F5H5T6 163 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 TIMM44O43615 452 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 MMP14P50281 582 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 COPAP53621 1224 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 KCNK10P57789 538 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 CBWD6Q4V339 395 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 CBWD3Q5JTY5 395 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 CBWD5Q5RIA9 395 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 SUGP1Q8IWZ8 645 aaKnown RBP12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 EDEM1Q92611 657 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 OTUB1Q96FW1 271 aaPredicted RBP12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 GID8Q9NWU2 228 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 V9GYQ6 96 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 KIDINS220Q9ULH0 1771 aa12.13□□□□□ -0.47
SMARCAD1-204ENST00000457823 NWD1Q149M9 1564 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 MYO1GB0I1T2 1018 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 ACKR2O00590 384 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 CXCL11O14625 94 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 APOA4P06727 396 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 SLURP2P0DP57 97 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 LHX1P48742 406 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 CORO7P57737 925 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 BST2Q10589 180 aaKnown RBP12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 ZBTB17Q13105 803 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 DMC1Q14565 340 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 LRRN4CLQ8ND94 238 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 TUBGCP3Q96CW5 907 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 IARS2Q9NSE4 1012 aaKnown RBP12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 TRMT6Q9UJA5 497 aaKnown RBP12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 HAO1Q9UJM8 370 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 FRMPD4Q14CM0 1322 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 SLC12A8A0AV02 714 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 PLIN5Q00G26 463 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 BMPR2Q13873 1038 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 ZPBP2Q6X784 338 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 ZSWIM2Q8NEG5 633 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 CYP4F12Q9HCS2 524 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 LRRC4BQ9NT99 713 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 NAALADL1Q9UQQ1 740 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 RUVBL2Q9Y230 463 aaKnown RBP12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 MAP2P11137 1827 aaKnown RBP12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 LRG1P02750 347 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 RARAP10276 462 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 NUDT2P50583 147 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 DDX39BQ13838 428 aaKnown RBP12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 GRIK4Q16099 956 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 NFE2Q16621 373 aaPredicted RBP12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 MFSD7Q6UXD7 560 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 NIPA1Q7RTP0 329 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 STRA8Q7Z7C7 330 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms