RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 PDZD8Q8NEN9 1154 aa14.89□□□□□ -0.03
SMPD4-215ENST00000457039 MRPS31Q92665 395 aaKnown RBP14.89□□□□□ -0.03
SMPD4-215ENST00000457039 ASB16Q96NS5 453 aa14.89□□□□□ -0.03
SMPD4-215ENST00000457039 TRPV4Q9HBA0 871 aa14.89□□□□□ -0.03
SMPD4-215ENST00000457039 TRPM5Q9NZQ8 1165 aa14.89□□□□□ -0.03
SMPD4-215ENST00000457039 GMIPQ9P107 970 aa14.89□□□□□ -0.03
SMPD4-215ENST00000457039 LIMD1Q9UGP4 676 aa14.89□□□□□ -0.03
SMPD4-215ENST00000457039 ZMYM5Q9UJ78 669 aa14.89□□□□□ -0.03
SMPD4-215ENST00000457039 MUC3AQ02505 3323 aa14.89□□□□□ -0.03
SMPD4-215ENST00000457039 ANAPC1Q9H1A4 1944 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 C2orf78A6NCI8 922 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 LRRC53A6NM62 1247 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 OLFM2O95897 454 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 OAS1P00973 400 aaKnown RBP14.88□□□□□ -0.03
SMPD4-215ENST00000457039 CHRNB2P17787 502 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 CDH5P33151 784 aaPredicted RBP14.88□□□□□ -0.03
SMPD4-215ENST00000457039 RGS7P49802 495 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 TAF3Q5VWG9 929 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 E4F1Q66K89 784 aaPredicted RBP14.88□□□□□ -0.03
SMPD4-215ENST00000457039 PARM1Q6UWI2 310 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 IRF2BP2Q7Z5L9 587 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 ZNF677Q86XU0 584 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 GPIHBP1Q8IV16 184 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 VSTM4Q8IW00 320 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 ZSCAN18Q8TBC5 510 aaPredicted RBP14.88□□□□□ -0.03
SMPD4-215ENST00000457039 SLC20A1Q8WUM9 679 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 FGF14Q92915 247 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 SMARCD2Q92925 531 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 IQCDQ96DY2 449 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 SLC22A12Q96S37 553 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 SLC4A5Q9BY07 1137 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 ULBP1Q9BZM6 244 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 NMUR1Q9HB89 426 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 LRRC4Q9HBW1 653 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 CYLDQ9NQC7 956 aa14.88□□□□□ -0.03
SMPD4-215ENST00000457039 CHORDC1Q9UHD1 332 aaPredicted RBP14.88□□□□□ -0.03
SMPD4-215ENST00000457039 ZBED1O96006 694 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 GYPCP04921 128 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 MMEP08473 750 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 USP17L7P0C7H9 530 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 FERP16591 822 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 PFKLP17858 780 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 KRT9P35527 623 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 TUBP50607 506 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 FMO1Q01740 532 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 CDR2Q01850 454 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 ADIGQ0VDE8 80 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 PDCLQ13371 301 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 MTSS1LQ765P7 747 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 SCD5Q86SK9 330 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 TMEM110Q86TL2 294 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 RNF135Q8IUD6 432 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 PASD1Q8IV76 773 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 ARID3BQ8IVW6 561 aaPredicted RBP14.87□□□□□ -0.03
SMPD4-215ENST00000457039 CMTM8Q8IZV2 173 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 MAB21L3Q8N8X9 362 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 C1orf131Q8NDD1 294 aaKnown RBP14.87□□□□□ -0.03
SMPD4-215ENST00000457039 OLIG1Q8TAK6 271 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 NXPE3Q969Y0 559 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 SYT11Q9BT88 431 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 RPP25Q9BUL9 199 aaKnown RBP14.87□□□□□ -0.03
SMPD4-215ENST00000457039 SLITRK6Q9H5Y7 841 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 KCNK12Q9HB15 430 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 CNGB3Q9NQW8 809 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 OSER1Q9NX31 292 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 AIPL1Q9NZN9 384 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 IGSF9Q9P2J2 1179 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 CAPN11Q9UMQ6 739 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 NUMBLQ9Y6R0 609 aa14.87□□□□□ -0.03
SMPD4-215ENST00000457039 NUP210Q8TEM1 1887 aaPredicted RBP14.86□□□□□ -0.03
SMPD4-215ENST00000457039 MYO16Q9Y6X6 1858 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 A0A1W2PQH9 124 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 ECI2O75521 394 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 PRAMEF12O95522 483 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 ASGR2P07307 311 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 LCP1P13796 627 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 DAOAP59103 153 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 ARID5AQ03989 594 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 SPECC1LQ69YQ0 1117 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 TANGO2Q6ICL3 276 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 FMNL3Q8IVF7 1028 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 SIX6OS1Q8N1H7 587 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 ZNF276Q8N554 614 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 ST13P5Q8NFI4 369 aaPredicted RBP14.86□□□□□ -0.03
SMPD4-215ENST00000457039 RSAD2Q8WXG1 361 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 NDRG1Q92597 394 aaKnown RBP14.86□□□□□ -0.03
SMPD4-215ENST00000457039 ELSPBP1Q96BH3 223 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 RSPRY1Q96DX4 576 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 RNF38Q9H0F5 515 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 TLR8Q9NR97 1041 aaKnown RBP14.86□□□□□ -0.03
SMPD4-215ENST00000457039 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.86□□□□□ -0.03
SMPD4-215ENST00000457039 TTC28Q96AY4 2481 aa14.86□□□□□ -0.03
SMPD4-215ENST00000457039 TRAV19A0A0A6YYK7 116 aa14.85□□□□□ -0.03
SMPD4-215ENST00000457039 E5RJQ4 531 aa14.85□□□□□ -0.03
SMPD4-215ENST00000457039 PIK3R2O00459 728 aa14.85□□□□□ -0.03
SMPD4-215ENST00000457039 LSM8O95777 96 aaKnown RBP14.85□□□□□ -0.03
SMPD4-215ENST00000457039 CYP1A1P04798 512 aaPredicted RBP14.85□□□□□ -0.03
SMPD4-215ENST00000457039 CCDC172P0C7W6 258 aa14.85□□□□□ -0.03
SMPD4-215ENST00000457039 HDCP19113 662 aa14.85□□□□□ -0.03
SMPD4-215ENST00000457039 VIPR2P41587 438 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms