RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 INPP5FQ9Y2H2 1132 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 GMEB1Q9Y692 573 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 ZNF536O15090 1300 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 PTPRJQ12913 1337 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 LYPLA1O75608 230 aaPredicted RBP10.73□□□□□ -0.69
CLIP4-208ENST00000456385 ZMPSTE24O75844 475 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 GH2P01242 217 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 DESP17661 470 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 AOC1P19801 751 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 PMLP29590 882 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 SH3BGRP55822 239 aaPredicted RBP10.73□□□□□ -0.69
CLIP4-208ENST00000456385 C1QBPQ07021 282 aaKnown RBP10.73□□□□□ -0.69
CLIP4-208ENST00000456385 DOK7Q18PE1 504 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 ABCB5Q2M3G0 1257 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 WDR44Q5JSH3 913 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 SH2D4BQ5SQS7 431 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 TDRD10Q5VZ19 366 aaKnown RBP10.73□□□□□ -0.69
CLIP4-208ENST00000456385 ATG16L1Q676U5 607 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 DCUN1D2Q6PH85 259 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 C1orf228Q6PIY5 440 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 SEPT12Q8IYM1 358 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 ICA1LQ8NDH6 482 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 BSNDQ8WZ55 320 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 VCPIP1Q96JH7 1222 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 FBXL18Q96ME1 805 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 EPB41L1Q9H4G0 881 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 C17orf75Q9HAS0 396 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 CDH22Q9UJ99 828 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 PACSIN3Q9UKS6 424 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 BLOC1S6Q9UL45 172 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 LZTS1Q9Y250 596 aa10.73□□□□□ -0.69
CLIP4-208ENST00000456385 LOC100653049A0A140TA62 436 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 H3BNX3 289 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 HNRNPDLO14979 420 aaKnown RBP10.72□□□□□ -0.69
CLIP4-208ENST00000456385 DHX15O43143 795 aaKnown RBP10.72□□□□□ -0.69
CLIP4-208ENST00000456385 CCNT2O60583 730 aaKnown RBP10.72□□□□□ -0.69
CLIP4-208ENST00000456385 RFPL1O75677 317 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 KRT34O76011 436 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 HLA-DRAP01903 254 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 CCDC166P0CW27 439 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 TNNI1P19237 187 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 MMP8P22894 467 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 IL1R2P27930 398 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 RPL5P46777 297 aaKnown RBP10.72□□□□□ -0.69
CLIP4-208ENST00000456385 QARSP47897 775 aaKnown RBP10.72□□□□□ -0.69
CLIP4-208ENST00000456385 STAT2P52630 851 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 SNRPFP62306 86 aaKnown RBP10.72□□□□□ -0.69
CLIP4-208ENST00000456385 BTKQ06187 659 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 TMED1Q13445 227 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 ITGA9Q13797 1035 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 MYLK3Q32MK0 819 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 TMEM259Q4ZIN3 620 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 MAP3K21Q5TCX8 1036 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 TTC39BQ5VTQ0 682 aaPredicted RBP10.72□□□□□ -0.69
CLIP4-208ENST00000456385 PRR5LQ6MZQ0 368 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 C15orf39Q6ZRI6 1047 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 TMEM179Q6ZVK1 233 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 IL31RAQ8NI17 732 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 CLMNQ96JQ2 1002 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 ZNF778Q96MU6 729 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 TRIM56Q9BRZ2 755 aaKnown RBP10.72□□□□□ -0.69
CLIP4-208ENST00000456385 CDCA7Q9BWT1 371 aaPredicted RBP10.72□□□□□ -0.69
CLIP4-208ENST00000456385 PI4KBQ9UBF8 816 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 APPL1Q9UKG1 709 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 POMPQ9Y244 141 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 PCDHGA4Q9Y5G9 962 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 TEX264Q9Y6I9 313 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 A0A0B4J269 797 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 RGL2O15211 777 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 ITM2AO43736 263 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 AP1G1O43747 822 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 SNNO75324 88 aaPredicted RBP10.72□□□□□ -0.69
CLIP4-208ENST00000456385 VNN1O95497 513 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 C1QAP02745 245 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 FDFT1P37268 417 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 ADARP55265 1226 aaKnown RBP10.72□□□□□ -0.69
CLIP4-208ENST00000456385 TUBB3Q13509 450 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 CUL2Q13617 745 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 DPYSL3Q14195 570 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 AOC3Q16853 763 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 CYP4A22Q5TCH4 519 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 PGM2L1Q6PCE3 622 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 RSPH3Q86UC2 560 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 SLC26A11Q86WA9 606 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 DEFB107AQ8IZN7 70 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 GPD1LQ8N335 351 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 CEP70Q8NHQ1 597 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 TEKT1Q969V4 418 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 RIT2Q99578 217 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 MXRA8Q9BRK3 442 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 RBM38Q9H0Z9 239 aaKnown RBP10.72□□□□□ -0.69
CLIP4-208ENST00000456385 NDUFA13Q9P0J0 144 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 FAM198AQ9UFP1 575 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 EXOC7Q9UPT5 735 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 MAD1L1Q9Y6D9 718 aa10.72□□□□□ -0.69
CLIP4-208ENST00000456385 DNAJA2O60884 412 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 ZC3H11AO75152 810 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLIP4-208ENST00000456385 COPAP53621 1224 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 EMP3P54852 163 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 SNAPC2Q13487 334 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 624.1 ms