RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 C3orf38Q5JPI3 329 aa4.43□□□□□ -1.7
R3HDM1-212ENST00000456040 PNLDC1Q8NA58 520 aaKnown RBP4.43□□□□□ -1.7
R3HDM1-212ENST00000456040 SMCR8Q8TEV9 937 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-212ENST00000456040 SNX18Q96RF0 628 aa4.43□□□□□ -1.7
R3HDM1-212ENST00000456040 MACROD1Q9BQ69 325 aa4.43□□□□□ -1.7
R3HDM1-212ENST00000456040 ADGRE3Q9BY15 652 aa4.43□□□□□ -1.7
R3HDM1-212ENST00000456040 TRIM5Q9C035 493 aa4.43□□□□□ -1.7
R3HDM1-212ENST00000456040 BHMT2Q9H2M3 363 aa4.43□□□□□ -1.7
R3HDM1-212ENST00000456040 DHX36Q9H2U1 1008 aaKnown RBP4.43□□□□□ -1.7
R3HDM1-212ENST00000456040 DNMT3BQ9UBC3 853 aaKnown RBP4.43□□□□□ -1.7
R3HDM1-212ENST00000456040 HDAC9Q9UKV0 1011 aa4.43□□□□□ -1.7
R3HDM1-212ENST00000456040 AMFRQ9UKV5 643 aa4.43□□□□□ -1.7
R3HDM1-212ENST00000456040 DRG1Q9Y295 367 aaKnown RBP4.43□□□□□ -1.7
R3HDM1-212ENST00000456040 FER1L4A9Z1Z3 1794 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 POC1B-GALNT4F8VUJ3 575 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 H7C4K7 107 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 CES2O00748 559 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 CYP2D6P10635 497 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 PEX2P28328 305 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 TKTP29401 623 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 UQCRC1P31930 480 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 GKP32189 559 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 PTDSS1P48651 473 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 RPS16P62249 146 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 FHL1Q13642 323 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 ARHGEF7Q14155 803 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 SLC29A2Q14542 456 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 CERKLQ49MI3 558 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 KIRREL2Q6UWL6 708 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 CRELD2Q6UXH1 353 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 DPY19L3Q6ZPD9 716 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 CHSY1Q86X52 802 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 SFTPA1Q8IWL2 248 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 YAF2Q8IY57 180 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 GALNT4Q8N4A0 578 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 TTC8Q8TAM2 541 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 IPCEF1Q8WWN9 437 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 TSR2Q969E8 191 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 ASB2Q96Q27 587 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 PRR25Q96S07 402 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 VN1R3Q9BXE9 311 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 CIPCQ9C0C6 399 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 NRIP3Q9NQ35 241 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 OBP2AQ9NY56 170 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 COL20A1Q9P218 1284 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 RGS17Q9UGC6 210 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 ZNF804BA4D1E1 1349 aa4.42□□□□□ -1.7
R3HDM1-212ENST00000456040 UBE2Q2LH0YL09 131 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 M0R3H8 397 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 PPP6CO00743 305 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 CD3EAPO15446 510 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 RRP9O43818 475 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 PMPCBO75439 489 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 INMTO95050 263 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 FGAP02671 866 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 TUBB4AP04350 444 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 PRR35P0CG20 571 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 RPL17P18621 184 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 ATF3P18847 181 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 KELP23276 732 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 FPR3P25089 353 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 EPHB2P29323 1055 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 NPY5RQ15761 445 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 MTX3Q5HYI7 312 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 DENND2CQ68D51 928 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 FCRL6Q6DN72 434 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 SERPINA13PQ6UXR4 307 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 ZNF66Q6ZN08 573 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 CATSPERGQ6ZRH7 1159 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 KCTD20Q7Z5Y7 419 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 NEK8Q86SG6 692 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 C14orf80Q86SX3 495 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 ITGB1BP2Q9UKP3 347 aa4.41□□□□□ -1.7
R3HDM1-212ENST00000456040 AQP7P3A6NL99 342 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 RAB27BO00194 218 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 PIAS2O75928 621 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 USP1O94782 785 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 CHRM5P08912 532 aaPredicted RBP4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 TXNP10599 105 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 PHKG2P15735 406 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 TPH1P17752 444 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 RHCEP18577 417 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 ACVR2AP27037 513 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 MPGP29372 298 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 CPT1AP50416 773 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 GATMP50440 423 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 RENBPP51606 427 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 ITGA8P53708 1063 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 TIRAPP58753 221 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 SSBP2P81877 361 aaPredicted RBP4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 TIAL1Q01085 375 aaKnown RBP eCLIP4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 RHDQ02161 417 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 ZNF750Q32MQ0 723 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 C4orf46Q504U0 113 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 RNASE12Q5GAN4 147 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 CEP78Q5JTW2 689 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 TMEM63BQ5T3F8 832 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 PTCHD4Q6ZW05 846 aa4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 YTHDF3Q7Z739 585 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-212ENST00000456040 SESTD1Q86VW0 696 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms