RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 DPYSL4O14531 572 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 HSF2BPO75031 334 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 FBXO21O94952 628 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 PPM1AP35813 382 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 GJC1P36383 396 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 GRIK1P39086 918 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 DAOAP59103 153 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 C15orf59Q2T9L4 293 aaPredicted RBP17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 CCDC14Q49A88 953 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 SLC8B1Q6J4K2 584 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 AADACL2Q6P093 401 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 VSTM1Q6UX27 236 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 FIBCD1Q8N539 461 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 TTC9BQ8N6N2 239 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 FBXO22Q8NEZ5 403 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 DPF3Q92784 378 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 ABHD8Q96I13 439 aa17.53■□□□□ 0.4
PDXDC1-204ENST00000455313 MTMR11A4FU01 709 aa17.52■□□□□ 0.4
PDXDC1-204ENST00000455313 PGRMC1O00264 195 aaKnown RBP17.52■□□□□ 0.4
PDXDC1-204ENST00000455313 ADAM12O43184 909 aa17.52■□□□□ 0.4
PDXDC1-204ENST00000455313 USP17L7P0C7H9 530 aa17.52■□□□□ 0.4
PDXDC1-204ENST00000455313 PYGMP11217 842 aa17.52■□□□□ 0.4
PDXDC1-204ENST00000455313 ATP2A2P16615 1042 aaKnown RBP17.52■□□□□ 0.4
PDXDC1-204ENST00000455313 SDC4P31431 198 aa17.52■□□□□ 0.4
PDXDC1-204ENST00000455313 ACAP1Q15027 740 aa17.52■□□□□ 0.4
PDXDC1-204ENST00000455313 SH3PXD2AQ5TCZ1 1133 aa17.52■□□□□ 0.4
PDXDC1-204ENST00000455313 SCN4BQ8IWT1 228 aa17.52■□□□□ 0.4
PDXDC1-204ENST00000455313 UBXN4Q92575 508 aa17.52■□□□□ 0.4
PDXDC1-204ENST00000455313 HERC2P3Q9BVR0 1158 aa17.52■□□□□ 0.4
PDXDC1-204ENST00000455313 ASNSD1Q9NWL6 643 aa17.52■□□□□ 0.4
PDXDC1-204ENST00000455313 RNF8O76064 485 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 VNN2O95498 520 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 ZBED1O96006 694 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 RPL17P18621 184 aaKnown RBP17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 GLUD2P49448 558 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 SLC5A3P53794 718 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 ATP11AP98196 1134 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 ROR1Q01973 937 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 DSG1Q02413 1049 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 SLC25A11Q02978 314 aaKnown RBP17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 CDO1Q16878 200 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 LRRC38Q5VT99 294 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 TXNRD3NBQ6F5E7 133 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 RNF19BQ6ZMZ0 732 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 RSRC2Q7L4I2 434 aaKnown RBP17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 DDX53Q86TM3 631 aaKnown RBP17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 SPATA4Q8NEY3 305 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 CLP1Q92989 425 aaKnown RBP17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 RPGRIP1Q96KN7 1286 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 RAD9AQ99638 391 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 AAASQ9NRG9 546 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 PCDHB12Q9Y5F1 795 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 BACE2Q9Y5Z0 518 aa17.52■□□□□ 0.39
PDXDC1-204ENST00000455313 MYO16Q9Y6X6 1858 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 WDR27A2RRH5 827 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 YJEFN3A6XGL0 299 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 E7ENQ6 273 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 TNFRSF10BO14763 440 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 SART1O43290 800 aaKnown RBP17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 FGGP02679 453 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 MAGEA11P43364 429 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 YWHAZP63104 245 aaKnown RBP17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 RAB6CQ53S08 254 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 HFE2Q6ZVN8 426 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 BHLHA9Q7RTU4 235 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 KATNAL2Q8IYT4 538 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 NOA1Q8NC60 698 aaKnown RBP17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 SCAMP5Q8TAC9 235 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 PHOSPHO2Q8TCD6 241 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 SPPL2BQ8TCT7 592 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 SP7Q8TDD2 431 aaPredicted RBP17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 RAB6CQ9H0N0 254 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 CRISPLD1Q9H336 500 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 TTC7AQ9ULT0 858 aaPredicted RBP17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 CHD9Q3L8U1 2897 aa17.51■□□□□ 0.39
PDXDC1-204ENST00000455313 LCHNA4D1U4 455 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 TLL1O43897 1013 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 DAB1O75553 588 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 GLI1P08151 1106 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 TFE3P19532 575 aaPredicted RBP17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 IL1R2P27930 398 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 MIPP30301 263 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 OR1D2P34982 312 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 PTPN9P43378 593 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 GPR15P49685 360 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 ITIH3Q06033 890 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 C2orf54Q08AI8 447 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 SMARCB1Q12824 385 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 DDR2Q16832 855 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 COL13A1Q5TAT6 717 aaPredicted RBP17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 SEL1L2Q5TEA6 688 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 POLNQ7Z5Q5 900 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 GOLGA1Q92805 767 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 C11orf84Q9BUA3 381 aaPredicted RBP17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 ADAM33Q9BZ11 813 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 MTIF3Q9H2K0 278 aaKnown RBP17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 NGRNQ9NPE2 291 aaKnown RBP17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.5■□□□□ 0.392e-7■□□□□ 10.4
PDXDC1-204ENST00000455313 USP3Q9Y6I4 520 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 TRIM66O15016 1216 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms