RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 SENP6Q9GZR1 1112 aaPredicted RBP10.05□□□□□ -0.8
LINC01940-201ENST00000455228 SPATA31A1Q5TZJ5 1347 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 ZNFX1Q9P2E3 1918 aaKnown RBP10.05□□□□□ -0.8
LINC01940-201ENST00000455228 TMEM238LA0A1B0GVL6 79 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 FAM86B1E9PN63 330 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 EIF3DO15371 548 aaKnown RBP eCLIP10.05□□□□□ -0.8
LINC01940-201ENST00000455228 RPS6KA4O75676 772 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 FAM86B2P0C5J1 330 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 BRAFP15056 766 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 DDX5P17844 614 aaKnown RBP10.05□□□□□ -0.8
LINC01940-201ENST00000455228 NAA20P61599 178 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 IQSEC1Q6DN90 963 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 C11orf63Q6NUN7 778 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 FAM122CQ6P4D5 195 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 MOXD1Q6UVY6 613 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 IFNL1Q8IU54 200 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 AFG1LQ8WV93 481 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 REXO5Q96IC2 774 aaKnown RBP10.05□□□□□ -0.8
LINC01940-201ENST00000455228 TGS1Q96RS0 853 aaKnown RBP10.05□□□□□ -0.8
LINC01940-201ENST00000455228 AMNQ9BXJ7 453 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 WNT8AQ9H1J5 351 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 CDC42EP4Q9H3Q1 356 aaKnown RBP10.05□□□□□ -0.8
LINC01940-201ENST00000455228 CDH7Q9ULB5 785 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 GSTTP1A0A1W2PQM5 241 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 SHOXO15266 292 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 ATMINO43313 823 aaPredicted RBP10.05□□□□□ -0.8
LINC01940-201ENST00000455228 THAP12O43422 761 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 ATP2B4P23634 1241 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 NR2C2P49116 596 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 MIGA2Q7L4E1 593 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 CYFIP1Q7L576 1253 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 SLC7A6OSQ96CW6 309 aaPredicted RBP10.05□□□□□ -0.8
LINC01940-201ENST00000455228 RBM14Q96PK6 669 aaKnown RBP10.05□□□□□ -0.8
LINC01940-201ENST00000455228 MAN1C1Q9NR34 630 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 SLC7A8Q9UHI5 535 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 DDX60LQ5H9U9 1706 aaKnown RBP10.04□□□□□ -0.8
LINC01940-201ENST00000455228 PLIN4Q96Q06 1357 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 ANKRD63C9JTQ0 380 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 MEIS2O14770 477 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 ACOX3O15254 700 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 MSH4O15457 936 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 CLOCKO15516 846 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 CTNNA2P26232 953 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 HOXA13P31271 388 aaPredicted RBP10.04□□□□□ -0.8
LINC01940-201ENST00000455228 SLC26A3P40879 764 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 S100A12P80511 92 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 GABPAQ06546 454 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 SMARCB1Q12824 385 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 MAP3K21Q5TCX8 1036 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 MFSD5Q6N075 450 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 RNF207Q6ZRF8 634 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 GALNT7Q86SF2 657 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 SLC13A5Q86YT5 568 aaPredicted RBP10.04□□□□□ -0.8
LINC01940-201ENST00000455228 ART4Q93070 314 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 SERPINB12Q96P63 405 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 ABCG4Q9H172 646 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 PPP1R14DQ9NXH3 145 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 PGAP2Q9UHJ9 254 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 PNMA3Q9UL41 463 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 ATAD5Q96QE3 1844 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 IGKV6D-41A0A0C4DH26 115 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 TCRBV7S2A1N4TA0A589 114 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 ZNF701M0R085 212 aaPredicted RBP10.04□□□□□ -0.8
LINC01940-201ENST00000455228 NDC80O14777 642 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 FOSP01100 380 aaPredicted RBP10.04□□□□□ -0.8
LINC01940-201ENST00000455228 FYNP06241 537 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 DLATP10515 647 aaKnown RBP10.04□□□□□ -0.8
LINC01940-201ENST00000455228 CREB1P16220 341 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 PRKAR1BP31321 381 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 RPL5P46777 297 aaKnown RBP10.04□□□□□ -0.8
LINC01940-201ENST00000455228 BFSP1Q12934 665 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 TRIP13Q15645 432 aaPredicted RBP10.04□□□□□ -0.8
LINC01940-201ENST00000455228 PPP4R4Q6NUP7 873 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 USP50Q70EL3 339 aaPredicted RBP10.04□□□□□ -0.8
LINC01940-201ENST00000455228 CYP2W1Q8TAV3 490 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 SLC2A14Q8TDB8 520 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 LRRC8CQ8TDW0 803 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 C1orf54Q8WWF1 131 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 TP53INP1Q96A56 240 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 CLPBQ9H078 707 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 DENND2DQ9H6A0 471 aaPredicted RBP10.04□□□□□ -0.8
LINC01940-201ENST00000455228 ETNK1Q9HBU6 452 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 MOV10Q9HCE1 1003 aaKnown RBP10.04□□□□□ -0.8
LINC01940-201ENST00000455228 CNGB3Q9NQW8 809 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 AGPAT3Q9NRZ7 376 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 ABI2Q9NYB9 513 aaPredicted RBP10.04□□□□□ -0.8
LINC01940-201ENST00000455228 CNTNAP4Q9C0A0 1308 aa10.04□□□□□ -0.8
LINC01940-201ENST00000455228 A0A1W2PRG0 241 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 MYCP01106 439 aaPredicted RBP10.03□□□□□ -0.8
LINC01940-201ENST00000455228 GSTM1P09488 218 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 ADSLP30566 484 aaPredicted RBP10.03□□□□□ -0.8
LINC01940-201ENST00000455228 PKLRP30613 574 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 SLC5A2P31639 672 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 KRT17Q04695 432 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 RUNX1T1Q06455 604 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 C4orf50Q6ZRC1 276 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 FBXO11Q86XK2 927 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 VSIG1Q86XK7 387 aa10.03□□□□□ -0.8
LINC01940-201ENST00000455228 SRRM1Q8IYB3 904 aaKnown RBP10.03□□□□□ -0.8
LINC01940-201ENST00000455228 CALML6Q8TD86 181 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms