RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SYCE3A1L190 88 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 LRRC10BA6NIK2 292 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 TULP2O00295 520 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 CYP26A1O43174 497 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 CKMP06732 381 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 RFX1P22670 979 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 BRD2P25440 801 aaKnown RBP14.95□□□□□ -0.02
HDAC4-205ENST00000454542 GDI1P31150 447 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 PGFP49763 221 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 COPB1P53618 953 aaKnown RBP14.95□□□□□ -0.02
HDAC4-205ENST00000454542 MFAP3P55082 362 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 PRKCQQ04759 706 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 PDE4CQ08493 712 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 IFRD2Q12894 506 aaPredicted RBP14.95□□□□□ -0.02
HDAC4-205ENST00000454542 CNGA2Q16280 664 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 ARHGAP29Q52LW3 1261 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 BHLHA9Q7RTU4 235 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 SIX5Q8N196 739 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 ARL14EPQ8N8R7 260 aaPredicted RBP14.95□□□□□ -0.02
HDAC4-205ENST00000454542 IRF7Q92985 503 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 ZFRQ96KR1 1074 aaKnown RBP14.95□□□□□ -0.02
HDAC4-205ENST00000454542 NAA15Q9BXJ9 866 aaKnown RBP14.95□□□□□ -0.02
HDAC4-205ENST00000454542 NAT10Q9H0A0 1025 aaKnown RBP14.95□□□□□ -0.02
HDAC4-205ENST00000454542 GANQ9H2C0 597 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 TRPC7Q9HCX4 862 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 PLCB1Q9NQ66 1216 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 CYLDQ9NQC7 956 aa14.95□□□□□ -0.02
HDAC4-205ENST00000454542 LGALS16A8MUM7 142 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 RPL34P49207 117 aaKnown RBP14.94□□□□□ -0.02
HDAC4-205ENST00000454542 MLLT6P55198 1093 aaPredicted RBP14.94□□□□□ -0.02
HDAC4-205ENST00000454542 STARD6P59095 220 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 ZXDBP98169 803 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 PLCB2Q00722 1185 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 IQCB1Q15051 598 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 MLF2Q15773 248 aaPredicted RBP14.94□□□□□ -0.02
HDAC4-205ENST00000454542 SKOR2Q2VWA4 1001 aaPredicted RBP14.94□□□□□ -0.02
HDAC4-205ENST00000454542 KLHDC7AQ5VTJ3 777 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 SCML4Q8N228 414 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 ZNF276Q8N554 614 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 KCTD13Q8WZ19 329 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 PBXIP1Q96AQ6 731 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 FAM83CQ9BQN1 747 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 BRD9Q9H8M2 597 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 NMUR1Q9HB89 426 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 OSER1Q9NX31 292 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 HESX1Q9UBX0 185 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 FBXL21Q9UKT6 434 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 CA14Q9ULX7 337 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 SIK3Q9Y2K2 1263 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 FHOD1Q9Y613 1164 aa14.94□□□□□ -0.02
HDAC4-205ENST00000454542 DPYSL4O14531 572 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 ZNF263O14978 683 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 COCHO43405 550 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 CALCAP01258 141 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 ATP1A3P13637 1013 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 KRT5P13647 590 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 HDCP19113 662 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 MTF1Q14872 753 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 HECTD3Q5T447 861 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 PM20D1Q6GTS8 502 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 KLHDC10Q6PID8 442 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 SCD5Q86SK9 330 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 FAM71AQ8IYT1 594 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 SLC35F5Q8WV83 523 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 MSANTD3Q96H12 275 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 CYP2S1Q96SQ9 504 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 LSM14BQ9BX40 385 aaKnown RBP14.93□□□□□ -0.02
HDAC4-205ENST00000454542 RNF38Q9H0F5 515 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 VPS16Q9H269 839 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 HPS4Q9NQG7 708 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 TLR8Q9NR97 1041 aaKnown RBP14.93□□□□□ -0.02
HDAC4-205ENST00000454542 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.93□□□□□ -0.02
HDAC4-205ENST00000454542 DNAJC12Q9UKB3 198 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 DAAM1Q9Y4D1 1078 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 ZDBF2Q9HCK1 2354 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 MIA3Q5JRA6 1907 aa14.93□□□□□ -0.02
HDAC4-205ENST00000454542 M0QYV0 167 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 TLR5O60602 858 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 GABBR2O75899 941 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 UCHL3P15374 230 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 AOC1P19801 751 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 GNA15P30679 374 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 PSEN1P49768 467 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 ZNF165P49910 485 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 CLCN5P51795 746 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 VCPP55072 806 aaKnown RBP14.92□□□□□ -0.02
HDAC4-205ENST00000454542 SLC8A3P57103 927 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 ARHGAP44Q17R89 818 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 ZSCAN23Q3MJ62 389 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 SLC44A4Q53GD3 710 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 GPIHBP1Q8IV16 184 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 YAF2Q8IY57 180 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 ZNF687Q8N1G0 1237 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 ANKRD20A12PQ8NF67 263 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 SH3RF2Q8TEC5 729 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 SECISBP2LQ93073 1101 aaKnown RBP14.92□□□□□ -0.02
HDAC4-205ENST00000454542 ERGIC2Q96RQ1 377 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 CCSER2Q9H7U1 834 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 TBC1D17Q9HA65 648 aa14.92□□□□□ -0.02
HDAC4-205ENST00000454542 ACP6Q9NPH0 428 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms