RNA–Protein interactions for RNA: ENST00000453640.1

SSXP1-201, Transcript of SSX family pseudogene 1, humanhuman

BASIC

Gene SSXP1, Length 473 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP1-201ENST00000453640 HNRNPA0Q13151 305 aaKnown RBP4.53□□□□□ -1.68
SSXP1-201ENST00000453640 CEP78Q5JTW2 689 aa4.53□□□□□ -1.68
SSXP1-201ENST00000453640 KIAA1614Q5VZ46 1190 aa4.53□□□□□ -1.68
SSXP1-201ENST00000453640 UNC13DQ70J99 1090 aa4.53□□□□□ -1.68
SSXP1-201ENST00000453640 C1QL2Q7Z5L3 287 aa4.53□□□□□ -1.68
SSXP1-201ENST00000453640 PNLDC1Q8NA58 520 aaKnown RBP4.53□□□□□ -1.68
SSXP1-201ENST00000453640 DAZAP1Q96EP5 407 aaKnown RBP4.53□□□□□ -1.68
SSXP1-201ENST00000453640 WDYHV1Q96HA8 205 aa4.53□□□□□ -1.68
SSXP1-201ENST00000453640 MSLNLQ96KJ4 702 aa4.53□□□□□ -1.68
SSXP1-201ENST00000453640 ZNF778Q96MU6 729 aa4.53□□□□□ -1.68
SSXP1-201ENST00000453640 SNX18Q96RF0 628 aa4.53□□□□□ -1.68
SSXP1-201ENST00000453640 APOL5Q9BWW9 433 aa4.53□□□□□ -1.68
SSXP1-201ENST00000453640 VN1R3Q9BXE9 311 aa4.53□□□□□ -1.68
SSXP1-201ENST00000453640 QTRT1Q9BXR0 403 aaKnown RBP4.53□□□□□ -1.68
SSXP1-201ENST00000453640 CIPCQ9C0C6 399 aa4.53□□□□□ -1.68
SSXP1-201ENST00000453640 DHX36Q9H2U1 1008 aaKnown RBP4.53□□□□□ -1.68
SSXP1-201ENST00000453640 AS3MTQ9HBK9 375 aa4.53□□□□□ -1.68
SSXP1-201ENST00000453640 PRDM11Q9NQV5 511 aa4.53□□□□□ -1.68
SSXP1-201ENST00000453640 ASIC5Q9NY37 505 aa4.53□□□□□ -1.68
SSXP1-201ENST00000453640 CACNA1IQ9P0X4 2223 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 TCRBV5S1A1TA0A578 114 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 SPRY2O43597 315 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 RGS10O43665 173 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 PIAS2O75928 621 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 PRR35P0CG20 571 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 BTF3P20290 206 aaKnown RBP4.52□□□□□ -1.69
SSXP1-201ENST00000453640 EPHA3P29320 983 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 EPHB2P29323 1055 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 ALDH5A1P51649 535 aaPredicted RBP4.52□□□□□ -1.69
SSXP1-201ENST00000453640 HTRA4P83105 476 aaPredicted RBP4.52□□□□□ -1.69
SSXP1-201ENST00000453640 KRTAP1-1Q07627 177 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 SLC29A2Q14542 456 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 SRSF7Q16629 238 aaKnown RBP eCLIP4.52□□□□□ -1.69
SSXP1-201ENST00000453640 CATSPERGQ6ZRH7 1159 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 BCDIN3DQ7Z5W3 292 aaKnown RBP4.52□□□□□ -1.69
SSXP1-201ENST00000453640 SIRT6Q8N6T7 355 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 ASB2Q96Q27 587 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 C1QTNF7Q9BXJ2 289 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 RNF7Q9UBF6 113 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 DKK4Q9UBT3 224 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 ZNF70Q9UC06 446 aaPredicted RBP4.52□□□□□ -1.69
SSXP1-201ENST00000453640 ITGB1BP2Q9UKP3 347 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 AMFRQ9UKV5 643 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 USP22Q9UPT9 525 aa4.52□□□□□ -1.69
SSXP1-201ENST00000453640 PPP6CO00743 305 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 CES2O00748 559 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 MYCLP12524 364 aaPredicted RBP4.51□□□□□ -1.69
SSXP1-201ENST00000453640 CPT1AP50416 773 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 LMAN2Q12907 356 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 KCNAB1Q14722 419 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 EZH2Q15910 746 aaKnown RBP4.51□□□□□ -1.69
SSXP1-201ENST00000453640 SUPT20HL1Q3ZLR7 823 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 MTX3Q5HYI7 312 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 ZNF626Q68DY1 528 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 PLAG1Q6DJT9 500 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 PPP4R4Q6NUP7 873 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 YTHDF3Q7Z739 585 aaKnown RBP4.51□□□□□ -1.69
SSXP1-201ENST00000453640 NEK8Q86SG6 692 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 DGKHQ86XP1 1220 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 SFTPA1Q8IWL2 248 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 METTL25Q8N6Q8 603 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 C8orf58Q8NAV2 365 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 C5orf34Q96MH7 638 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 MMS19Q96T76 1030 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 SLC29A3Q9BZD2 475 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 SEMA4CQ9C0C4 833 aa4.51□□□□□ -1.69
SSXP1-201ENST00000453640 POC1B-GALNT4F8VUJ3 575 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 PSMD9O00233 223 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 MT-ND5P03915 603 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 TUBB4AP04350 444 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 PARP1P09874 1014 aaKnown RBP4.5□□□□□ -1.69
SSXP1-201ENST00000453640 CYP2A6P11509 494 aaPredicted RBP4.5□□□□□ -1.69
SSXP1-201ENST00000453640 TPH1P17752 444 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 SFPQP23246 707 aaKnown RBP eCLIP4.5□□□□□ -1.69
SSXP1-201ENST00000453640 KELP23276 732 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 CERS1P27544 350 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 NTSR1P30989 418 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 CARSP49589 748 aaKnown RBP4.5□□□□□ -1.69
SSXP1-201ENST00000453640 DIO1P49895 249 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 GATMP50440 423 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 ZNF81P51508 661 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 PGDP52209 483 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 STK3Q13188 491 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 PAPD7Q5XG87 772 aaKnown RBP4.5□□□□□ -1.69
SSXP1-201ENST00000453640 PTCHD4Q6ZW05 846 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 RAB11FIP4Q86YS3 637 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 YAF2Q8IY57 180 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 KRT78Q8N1N4 520 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 GALNT4Q8N4A0 578 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 SNX22Q96L94 193 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 BTBD1Q9H0C5 482 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 DDX21Q9NR30 783 aaKnown RBP eCLIP4.5□□□□□ -1.69
SSXP1-201ENST00000453640 PDGFCQ9NRA1 345 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 VPS51Q9UID3 782 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 RIMKLBQ9ULI2 386 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 CAPN11Q9UMQ6 739 aa4.5□□□□□ -1.69
SSXP1-201ENST00000453640 ZNF804BA4D1E1 1349 aa4.49□□□□□ -1.69
SSXP1-201ENST00000453640 SMIM35A0A1B0GVV1 85 aa4.49□□□□□ -1.69
SSXP1-201ENST00000453640 EXOC5O00471 708 aa4.49□□□□□ -1.69
SSXP1-201ENST00000453640 PARNO95453 639 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms