RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 CTAGE3PQ8IX95 158 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 PRPF31Q8WWY3 499 aaKnown RBP13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 SLC13A1Q9BZW2 595 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 IQANK1A0A1B0GTG1 560 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 B2RBV5 119 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 TGDSO95455 350 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 LMNAP02545 664 aaKnown RBP13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 KRT7P08729 469 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 SRGAP2CP0DJJ0 459 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 TAP1Q03518 808 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 PPP1R2P3Q6NXS1 205 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 DARS2Q6PI48 645 aaKnown RBP13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 PDCD7Q8N8D1 485 aaKnown RBP13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 MTMR14Q8NCE2 650 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 RBM15BQ8NDT2 890 aaKnown RBP13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 CMASQ8NFW8 434 aaPredicted RBP13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 FAM161BQ96MY7 647 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 ZNF518BQ9C0D4 1074 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 KCNG1Q9UIX4 513 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 USP18Q9UMW8 372 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 EFR3BQ9Y2G0 817 aa13.11□□□□□ -0.31
THUMPD3-206ENST00000452837 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 CAPN14A8MX76 684 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 SMAPO00193 183 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 ABLIM1O14639 778 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 HNRNPCL1O60812 293 aaKnown RBP13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 TRUB2O95900 331 aaKnown RBP13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 GJB1P08034 283 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 PGM1P36871 562 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 HMGCS2P54868 508 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 YWHAZP63104 245 aaKnown RBP13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 TRPC3Q13507 836 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 KRT72Q14CN4 511 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 C15orf59Q2T9L4 293 aaPredicted RBP13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 ARID3BQ8IVW6 561 aaPredicted RBP13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 THNSL1Q8IYQ7 743 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 TTC13Q8NBP0 860 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 TEKT4Q8WW24 435 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 DDX50Q9BQ39 737 aaKnown RBP13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 PHACTR1Q9C0D0 580 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 SYNCQ9H7C4 482 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 MYOZ2Q9NPC6 264 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 AFG3L2Q9Y4W6 797 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 ASB3Q9Y575 518 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 MCF2LO15068 1137 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 GNAT1P11488 350 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 OCRLQ01968 901 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 KDSRQ06136 332 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 HADHQ16836 314 aaKnown RBP13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 DUOXA2Q1HG44 320 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 SGSM1Q2NKQ1 1148 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 ZCCHC23Q6ZST2 131 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 TTLL6Q8N841 843 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 FAF2Q96CS3 445 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 PDGFDQ9GZP0 370 aaPredicted RBP13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 RAB6BQ9NRW1 208 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 GPATCH2LQ9NWQ4 482 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 STX18Q9P2W9 335 aaKnown RBP13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 IKBKGQ9Y6K9 419 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 COPEO14579 308 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 SMIM24O75264 130 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 GRAP2O75791 330 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 NPTXRO95502 500 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 LBRQ14739 615 aaKnown RBP13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 NBPF12Q5TAG4 269 aaPredicted RBP13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 CCDC62Q6P9F0 684 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 LRRC71Q8N4P6 559 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 CCDC33Q8N5R6 958 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 SLC25A41Q8N5S1 370 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 IFT43Q96FT9 208 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 ACO2Q99798 780 aaKnown RBP13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 EBF4Q9BQW3 602 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 TMEM134Q9H6X4 195 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 SMYD3Q9H7B4 428 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 USP29Q9HBJ7 922 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 PPARGC1AQ9UBK2 798 aaKnown RBP13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 LRCH1Q9Y2L9 728 aa13.1□□□□□ -0.31
THUMPD3-206ENST00000452837 HMX2A2RU54 273 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 B4GALT5O43286 388 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 RFPL1O75677 317 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 USP1O94782 785 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 KRT19P08727 400 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 CSH1P0DML2 217 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 CSH2P0DML3 217 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 CDH6P55285 790 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 ROR1Q01973 937 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 TARBP2Q15633 366 aaKnown RBP13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 CHI3L2Q15782 390 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 CDO1Q16878 200 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 IRGCQ6NXR0 463 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 TRMT10BQ6PF06 316 aaKnown RBP13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 DPH6Q7L8W6 267 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 CAND1Q86VP6 1230 aaKnown RBP13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 PANX3Q96QZ0 392 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 POPDC2Q9HBU9 364 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 SPATS2LQ9NUQ6 558 aaKnown RBP13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 CPSF3Q9UKF6 684 aaKnown RBP13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 PLA2G4CQ9UP65 541 aa13.09□□□□□ -0.31
THUMPD3-206ENST00000452837 PLLPQ9Y342 182 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms