RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 ACAD10Q6JQN1 1059 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 TMC5Q6UXY8 1006 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 GPRIN1Q7Z2K8 1008 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 GPR149Q86SP6 731 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 ERICH1Q86X53 443 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 ZDHHC17Q8IUH5 632 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 GPR152Q8TDT2 470 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 IPO4Q8TEX9 1081 aaKnown RBP12.19□□□□□ -0.46
SCN9A-204ENST00000452182 CPA5Q8WXQ8 436 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 OVCA2Q8WZ82 227 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 VCPIP1Q96JH7 1222 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 PPP1R9BQ96SB3 815 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 CPXM1Q96SM3 734 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 LRRC3Q9BY71 257 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 ISCUQ9H1K1 167 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 S1PR5Q9H228 398 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 ADAM7Q9H2U9 754 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 DEF6Q9H4E7 631 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 ST7Q9NRC1 585 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 NAGPAQ9UK23 515 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 NENFQ9UMX5 172 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 SCML2Q9UQR0 700 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 C2orf16Q68DN1 1984 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 XIRP2A4UGR9 3374 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 E5RJQ4 531 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 AKR1B10O60218 316 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 RTN2O75298 545 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 FBXO21O94952 628 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 FGF19O95750 216 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 YWHAQP27348 245 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 PPP3CCP48454 512 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 RGS7P49802 495 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 USP46P62068 366 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 ADIGQ0VDE8 80 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 MTMR3Q13615 1198 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 PTPN20Q4JDL3 420 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 TMC8Q8IU68 726 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 LRRC8AQ8IWT6 810 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 SIX6OS1Q8N1H7 587 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 C12orf76Q8N812 135 aaPredicted RBP12.19□□□□□ -0.46
SCN9A-204ENST00000452182 SMRP1Q8NCR6 262 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 CCDC112Q8NEF3 446 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 PDZD8Q8NEN9 1154 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 SCAMP5Q8TAC9 235 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 IRGQQ8WZA9 623 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 SMG7Q92540 1137 aaKnown RBP12.19□□□□□ -0.46
SCN9A-204ENST00000452182 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.19□□□□□ -0.46
SCN9A-204ENST00000452182 DNMT3BQ9UBC3 853 aaKnown RBP12.19□□□□□ -0.46
SCN9A-204ENST00000452182 STRIP2Q9ULQ0 834 aa12.19□□□□□ -0.46
SCN9A-204ENST00000452182 DENND4CQ5VZ89 1909 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 MYO16Q9Y6X6 1858 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 NOTCH4Q99466 2003 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 SART1O43290 800 aaKnown RBP12.18□□□□□ -0.46
SCN9A-204ENST00000452182 LCA5LO95447 670 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 ZBED1O96006 694 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 ZDHHC11BP0C7U3 371 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 SCNN1AP37088 669 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 GSCP56915 257 aaPredicted RBP12.18□□□□□ -0.46
SCN9A-204ENST00000452182 GFPT1Q06210 699 aaPredicted RBP12.18□□□□□ -0.46
SCN9A-204ENST00000452182 PTP4A2Q12974 167 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 CCDC85BQ15834 202 aaPredicted RBP12.18□□□□□ -0.46
SCN9A-204ENST00000452182 PABPC1LQ4VXU2 614 aaKnown RBP12.18□□□□□ -0.46
SCN9A-204ENST00000452182 RARS2Q5T160 578 aaKnown RBP12.18□□□□□ -0.46
SCN9A-204ENST00000452182 CYP4A22Q5TCH4 519 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 SNX30Q5VWJ9 437 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 CES5AQ6NT32 575 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 ALKBH5Q6P6C2 394 aaKnown RBP12.18□□□□□ -0.46
SCN9A-204ENST00000452182 MON1BQ7L1V2 547 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 MON1AQ86VX9 555 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 C18orf8Q96DM3 657 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 SLITRK1Q96PX8 696 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 SYNCQ9H7C4 482 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 UBE2ZQ9H832 354 aaPredicted RBP12.18□□□□□ -0.46
SCN9A-204ENST00000452182 PIDD1Q9HB75 910 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 IL21Q9HBE4 155 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 ASAH2Q9NR71 780 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 ADAM22Q9P0K1 906 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 COG5Q9UP83 839 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 OBSL1O75147 1896 aa12.18□□□□□ -0.46
SCN9A-204ENST00000452182 SOBPA7XYQ1 873 aa12.17□□□□□ -0.46
SCN9A-204ENST00000452182 PAPSS1O43252 624 aaPredicted RBP12.17□□□□□ -0.46
SCN9A-204ENST00000452182 FTLP02792 175 aaPredicted RBP12.17□□□□□ -0.46
SCN9A-204ENST00000452182 F11P03951 625 aa12.17□□□□□ -0.46
SCN9A-204ENST00000452182 ERBB2P04626 1255 aa12.17□□□□□ -0.46
SCN9A-204ENST00000452182 CALB1P05937 261 aa12.17□□□□□ -0.46
SCN9A-204ENST00000452182 RHOP08100 348 aa12.17□□□□□ -0.46
SCN9A-204ENST00000452182 LCP1P13796 627 aa12.17□□□□□ -0.46
SCN9A-204ENST00000452182 CYLC1P35663 651 aaPredicted RBP12.17□□□□□ -0.46
SCN9A-204ENST00000452182 DAOAP59103 153 aa12.17□□□□□ -0.46
SCN9A-204ENST00000452182 MRPS5P82675 430 aaKnown RBP12.17□□□□□ -0.46
SCN9A-204ENST00000452182 FOXK1P85037 733 aa12.17□□□□□ -0.46
SCN9A-204ENST00000452182 TAF10Q12962 218 aa12.17□□□□□ -0.46
SCN9A-204ENST00000452182 DSG2Q14126 1118 aa12.17□□□□□ -0.46
SCN9A-204ENST00000452182 ZNF268Q14587 947 aaPredicted RBP12.17□□□□□ -0.46
SCN9A-204ENST00000452182 ATAT1Q5SQI0 421 aa12.17□□□□□ -0.46
SCN9A-204ENST00000452182 C10orf76Q5T2E6 689 aa12.17□□□□□ -0.46
SCN9A-204ENST00000452182 MMS22LQ6ZRQ5 1243 aa12.17□□□□□ -0.46
SCN9A-204ENST00000452182 SCUBE3Q8IX30 993 aa12.17□□□□□ -0.46
SCN9A-204ENST00000452182 MCOLN2Q8IZK6 566 aa12.17□□□□□ -0.46
SCN9A-204ENST00000452182 STKLD1Q8NE28 680 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms