RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 BUB1BO60566 1050 aaPredicted RBP15.4■□□□□ 0.06
CDK3-202ENST00000448471 KRT37O76014 449 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 CLSTN1O94985 981 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 KIF4AO95239 1232 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 KRT19P08727 400 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 CREMQ03060 361 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 ZBTB6Q15916 424 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 TEX35Q5T0J7 233 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 C11orf63Q6NUN7 778 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 PEX26Q7Z412 305 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 GRASPQ7Z6J2 395 aaPredicted RBP15.4■□□□□ 0.06
CDK3-202ENST00000448471 DAAM2Q86T65 1068 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 NT5DC3Q86UY8 548 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 GPR65Q8IYL9 337 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 TTC39CQ8N584 583 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 COG1Q8WTW3 980 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 KIF12Q96FN5 646 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 VCPIP1Q96JH7 1222 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 MMS19Q96T76 1030 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 TRIM6Q9C030 488 aaPredicted RBP15.4■□□□□ 0.06
CDK3-202ENST00000448471 SNTG2Q9NY99 539 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 CNTN3Q9P232 1028 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 ADAM28Q9UKQ2 775 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 FBXO4Q9UKT5 387 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 CDH7Q9ULB5 785 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 GIT1Q9Y2X7 761 aa15.4■□□□□ 0.06
CDK3-202ENST00000448471 COL4A3Q01955 1670 aa15.39■□□□□ 0.05
CDK3-202ENST00000448471 ZNF185O15231 689 aa15.39■□□□□ 0.05
CDK3-202ENST00000448471 PAFAH1B1P43034 410 aa15.39■□□□□ 0.05
CDK3-202ENST00000448471 UBXN2BQ14CS0 331 aa15.39■□□□□ 0.05
CDK3-202ENST00000448471 MLF2Q15773 248 aaPredicted RBP15.39■□□□□ 0.05
CDK3-202ENST00000448471 WDR72Q3MJ13 1102 aa15.39■□□□□ 0.05
CDK3-202ENST00000448471 XKR4Q5GH76 650 aa15.39■□□□□ 0.05
CDK3-202ENST00000448471 MCOLN2Q8IZK6 566 aa15.39■□□□□ 0.05
CDK3-202ENST00000448471 ZNF606Q8WXB4 792 aa15.39■□□□□ 0.05
CDK3-202ENST00000448471 PBKQ96KB5 322 aa15.39■□□□□ 0.05
CDK3-202ENST00000448471 CAPZA3Q96KX2 299 aa15.39■□□□□ 0.05
CDK3-202ENST00000448471 DDX23Q9BUQ8 820 aaKnown RBP15.39■□□□□ 0.05
CDK3-202ENST00000448471 PDCL3Q9H2J4 239 aa15.39■□□□□ 0.05
CDK3-202ENST00000448471 NXF3Q9H4D5 531 aaKnown RBP15.39■□□□□ 0.05
CDK3-202ENST00000448471 CTTNBP2NLQ9P2B4 639 aa15.39■□□□□ 0.05
CDK3-202ENST00000448471 FBXW11Q9UKB1 542 aa15.39■□□□□ 0.05
CDK3-202ENST00000448471 AMFRQ9UKV5 643 aa15.39■□□□□ 0.05
CDK3-202ENST00000448471 MTF2Q9Y483 593 aaPredicted RBP15.39■□□□□ 0.05
CDK3-202ENST00000448471 NCOR2Q9Y618 2525 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 PDE2AO00408 941 aaPredicted RBP15.38■□□□□ 0.05
CDK3-202ENST00000448471 THAP12O43422 761 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 LSM8O95777 96 aaKnown RBP15.38■□□□□ 0.05
CDK3-202ENST00000448471 TUBBP07437 444 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 PAEPP09466 180 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 POLR2BP30876 1174 aaKnown RBP15.38■□□□□ 0.05
CDK3-202ENST00000448471 NSFP46459 744 aaKnown RBP15.38■□□□□ 0.05
CDK3-202ENST00000448471 NOMO3P69849 1222 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 NTHL1P78549 312 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 PRKCQQ04759 706 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 CSTF1Q05048 431 aaKnown RBP15.38■□□□□ 0.05
CDK3-202ENST00000448471 CFAP221Q4G0U5 840 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 SLC44A4Q53GD3 710 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 PRSS55Q6UWB4 352 aaPredicted RBP15.38■□□□□ 0.05
CDK3-202ENST00000448471 MTSS1LQ765P7 747 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 MTERF4Q7Z6M4 381 aaKnown RBP15.38■□□□□ 0.05
CDK3-202ENST00000448471 PHF13Q86YI8 300 aaPredicted RBP15.38■□□□□ 0.05
CDK3-202ENST00000448471 HACE1Q8IYU2 909 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 BEST2Q8NFU1 509 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 ZNF653Q96CK0 615 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 HES6Q96HZ4 224 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 HPDLQ96IR7 371 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 ZNF518BQ9C0D4 1074 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 NXF1Q9UBU9 619 aaKnown RBP15.38■□□□□ 0.05
CDK3-202ENST00000448471 PCDHGC3Q9UN70 934 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 AGAP1Q9UPQ3 857 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 PCDHGA2Q9Y5H1 932 aa15.38■□□□□ 0.05
CDK3-202ENST00000448471 XPOTO43592 962 aaKnown RBP15.37■□□□□ 0.05
CDK3-202ENST00000448471 TADA2AO75478 443 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 RECQL4O94761 1208 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 CALCAP01258 141 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 KCNE1P15382 129 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 H2AFXP16104 143 aaPredicted RBP15.37■□□□□ 0.05
CDK3-202ENST00000448471 CD58P19256 250 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 SDHBP21912 280 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 AKAP5P24588 427 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 GRIK3Q13003 919 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 RTP2Q5QGT7 225 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 CCDC181Q5TID7 509 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 LIN9Q5TKA1 542 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 LRRC52Q8N7C0 313 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 MSANTD4Q8NCY6 345 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 GSTCDQ8NEC7 633 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 FGF13Q92913 245 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 CYFIP2Q96F07 1278 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 OSBPL6Q9BZF3 934 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 UBQLN1Q9UMX0 589 aaKnown RBP15.37■□□□□ 0.05
CDK3-202ENST00000448471 POLIQ9UNA4 740 aa15.37■□□□□ 0.05
CDK3-202ENST00000448471 MTCL1Q9Y4B5 1905 aaKnown RBP15.37■□□□□ 0.05
CDK3-202ENST00000448471 FAM170BA6NMN3 283 aa15.36■□□□□ 0.05
CDK3-202ENST00000448471 HNRNPA1P09651 372 aaKnown RBP eCLIP15.36■□□□□ 0.05
CDK3-202ENST00000448471 CXCR5P32302 372 aa15.36■□□□□ 0.05
CDK3-202ENST00000448471 CDH5P33151 784 aaPredicted RBP15.36■□□□□ 0.05
CDK3-202ENST00000448471 MAGEA9P43362 315 aa15.36■□□□□ 0.05
CDK3-202ENST00000448471 ATXN1P54253 815 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms