RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 MAOBP27338 520 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 KIF5BP33176 963 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 HNF1BP35680 557 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 SREBF1P36956 1147 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 HAND2P61296 217 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 AMPD2Q01433 879 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 TUSC3Q13454 348 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 CEP55Q53EZ4 464 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 KIAA1614Q5VZ46 1190 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 INO80CQ6PI98 192 aaPredicted RBP3.61□□□□□ -1.83
PMS1-215ENST00000447232 TRMT1LQ7Z2T5 733 aaKnown RBP3.61□□□□□ -1.83
PMS1-215ENST00000447232 FRAT1Q92837 279 aaPredicted RBP3.61□□□□□ -1.83
PMS1-215ENST00000447232 ZNF512Q96ME7 567 aaPredicted RBP3.61□□□□□ -1.83
PMS1-215ENST00000447232 EIF2AQ9BY44 585 aaKnown RBP3.61□□□□□ -1.83
PMS1-215ENST00000447232 MINDY3Q9H8M7 445 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 LIN7BQ9HAP6 207 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 LRRC4CQ9HCJ2 640 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 GKN1Q9NS71 199 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 TM7SF3Q9NS93 570 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 HIVEP1P15822 2718 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 SPG11Q96JI7 2443 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 ANTXRLA6NF34 631 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 DDX39AO00148 427 aaKnown RBP3.61□□□□□ -1.83
PMS1-215ENST00000447232 CILPO75339 1184 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 ALDH1A2O94788 518 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 CYP11A1P05108 521 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 JUPP14923 745 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 U2AF2P26368 475 aaKnown RBP eCLIP3.61□□□□□ -1.832e-7■■■■□ 24.4
PMS1-215ENST00000447232 ELF1P32519 619 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 GJA4P35212 333 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 CLDN6P56747 220 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 RPL6Q02878 288 aaKnown RBP3.61□□□□□ -1.83
PMS1-215ENST00000447232 TARDBPQ13148 414 aaKnown RBP eCLIP3.61□□□□□ -1.83
PMS1-215ENST00000447232 BYSLQ13895 437 aaKnown RBP3.61□□□□□ -1.83
PMS1-215ENST00000447232 NAB2Q15742 525 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 LINC00303Q3SY05 128 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 PAOXQ6QHF9 649 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 ANKS3Q6ZW76 656 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 KSR1Q8IVT5 923 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 ELMOD1Q8N336 334 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 GIMAP7Q8NHV1 300 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 CCDC26Q8TAB7 109 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 OSBPL1AQ9BXW6 950 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 RNF41Q9H4P4 317 aaPredicted RBP3.61□□□□□ -1.83
PMS1-215ENST00000447232 EBF3Q9H4W6 596 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 FAM124BQ9H5Z6 455 aaPredicted RBP3.61□□□□□ -1.83
PMS1-215ENST00000447232 CYP4F11Q9HBI6 524 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 GABBR1Q9UBS5 961 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 SUSD2Q9UGT4 822 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 ADGRE2Q9UHX3 823 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 PCDHA6Q9UN73 950 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 PCDHGA1Q9Y5H4 931 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 PCDHA8Q9Y5H6 950 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 ANK1P16157 1881 aa3.61□□□□□ -1.83
PMS1-215ENST00000447232 TMEM189-UBE2V1I3L0A0 370 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 K7EQS6 105 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 IPO5O00410 1097 aaKnown RBP3.6□□□□□ -1.83
PMS1-215ENST00000447232 RECQL4O94761 1208 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 ECEL1O95672 775 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 ADH5P11766 374 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 RLBP1P12271 317 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 IGFBP6P24592 240 aaPredicted RBP3.6□□□□□ -1.83
PMS1-215ENST00000447232 SERPINB4P48594 390 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 BNC1Q01954 994 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 TWF1Q12792 350 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 POU4F3Q15319 338 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 SEC23AQ15436 765 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 CPSF6Q16630 551 aaKnown RBP eCLIP3.6□□□□□ -1.83
PMS1-215ENST00000447232 TSHZ3Q63HK5 1081 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 TRIM68Q6AZZ1 485 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 CD300LGQ6UXG3 332 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 SLC36A4Q6YBV0 504 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 NFXL1Q6ZNB6 911 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 USP49Q70CQ1 688 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 GAREM2Q75VX8 874 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 NIPA1Q7RTP0 329 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 RHPN2Q8IUC4 686 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 SMAP1Q8IYB5 467 aaPredicted RBP3.6□□□□□ -1.83
PMS1-215ENST00000447232 DEFB119Q8N690 84 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 CD101Q93033 1021 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 ZNF419Q96HQ0 510 aaPredicted RBP3.6□□□□□ -1.83
PMS1-215ENST00000447232 SEMA3CQ99985 751 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 TRIM56Q9BRZ2 755 aaKnown RBP3.6□□□□□ -1.83
PMS1-215ENST00000447232 NXF3Q9H4D5 531 aaKnown RBP3.6□□□□□ -1.83
PMS1-215ENST00000447232 GAREM1Q9H706 876 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 THG1LQ9NWX6 298 aaKnown RBP3.6□□□□□ -1.83
PMS1-215ENST00000447232 GMIPQ9P107 970 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 ZSWIM5Q9P217 1185 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 MAFFQ9ULX9 164 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 PCDHA10Q9Y5I2 948 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 ACTL7BQ9Y614 415 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 KNL1Q8NG31 2342 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 ANO9A1A5B4 782 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 CASTOR2A6NHX0 329 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 CER1O95813 267 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 PRKCBP05771 671 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 NFICP08651 508 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 ARSAP15289 507 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 TKTP29401 623 aaKnown RBP3.6□□□□□ -1.83
PMS1-215ENST00000447232 PRKCEQ02156 737 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms