RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 IQCGQ9H095 443 aaKnown RBP19.88■□□□□ 0.77
SDCBP-204ENST00000447182 ARHGEF4Q9NR80 690 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 MKS1Q9NXB0 559 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 ZNF212Q9UDV6 495 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 PLLPQ9Y342 182 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 TTLL3Q9Y4R7 772 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 MAGEC1O60732 1142 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 TBX10O75333 385 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 KRT37O76014 449 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 TNNC2P02585 160 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 SKIP12755 728 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 NRLP54845 237 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 SESN3P58005 492 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 FAM47CQ5HY64 1035 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 WDR60Q8WVS4 1066 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 SCG3Q8WXD2 468 aaKnown RBP19.88■□□□□ 0.77
SDCBP-204ENST00000447182 RTP4Q96DX8 246 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 ANKRD36BP1Q96IX9 119 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 SYT15Q9BQS2 421 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 NMUR2Q9GZQ4 415 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 ASNSD1Q9NWL6 643 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 LOC285556D6RIA3 1793 aa19.88■□□□□ 0.77
SDCBP-204ENST00000447182 EIF4E1BA6NMX2 242 aaKnown RBP19.87■□□□□ 0.77
SDCBP-204ENST00000447182 CAPN14A8MX76 684 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 TRDMT1O14717 391 aaKnown RBP19.87■□□□□ 0.77
SDCBP-204ENST00000447182 SNRPAP09012 282 aaKnown RBP19.87■□□□□ 0.77
SDCBP-204ENST00000447182 CCNFP41002 786 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 AP1B1Q10567 949 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 TFDP2Q14188 446 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 ZRSR2Q15696 482 aaKnown RBP19.87■□□□□ 0.77
SDCBP-204ENST00000447182 IER5Q5VY09 327 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 CDHR3Q6ZTQ4 885 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 STMN2Q93045 179 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 FAF2Q96CS3 445 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 YIPF3Q9GZM5 350 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 PAK5Q9P286 719 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 FAM237BA0A1B0GVD1 139 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 TRIM49D1C9J1S8 452 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 E5RJQ4 531 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 I3L4J1 428 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 PRKCBP05771 671 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 PROZP22891 400 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 PRKCHP24723 683 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 YWHAZP63104 245 aaKnown RBP19.87■□□□□ 0.77
SDCBP-204ENST00000447182 ATG16L1Q676U5 607 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 TMEM154Q6P9G4 183 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 NPNTQ6UXI9 565 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 PRPF39Q86UA1 669 aaKnown RBP19.87■□□□□ 0.77
SDCBP-204ENST00000447182 TMPRSS6Q8IU80 811 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 USP29Q9HBJ7 922 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 SPATS2LQ9NUQ6 558 aaKnown RBP19.87■□□□□ 0.77
SDCBP-204ENST00000447182 SIRPGQ9P1W8 387 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 ANK1P16157 1881 aa19.87■□□□□ 0.77
SDCBP-204ENST00000447182 C2orf71A6NGG8 1288 aa19.86■□□□□ 0.77
SDCBP-204ENST00000447182 F8W8V4 182 aa19.86■□□□□ 0.77
SDCBP-204ENST00000447182 CLGNO14967 610 aa19.86■□□□□ 0.77
SDCBP-204ENST00000447182 ATP5BP06576 529 aaKnown RBP19.86■□□□□ 0.77
SDCBP-204ENST00000447182 FESP07332 822 aa19.86■□□□□ 0.77
SDCBP-204ENST00000447182 PGM1P36871 562 aa19.86■□□□□ 0.77
SDCBP-204ENST00000447182 PEX19P40855 299 aa19.86■□□□□ 0.77
SDCBP-204ENST00000447182 ZNF143P52747 638 aaPredicted RBP19.86■□□□□ 0.77
SDCBP-204ENST00000447182 LGSNQ5TDP6 509 aa19.86■□□□□ 0.77
SDCBP-204ENST00000447182 ZC3H18Q86VM9 953 aaKnown RBP19.86■□□□□ 0.77
SDCBP-204ENST00000447182 PEBP4Q96S96 227 aa19.86■□□□□ 0.77
SDCBP-204ENST00000447182 VCXQ9H320 206 aa19.86■□□□□ 0.77
SDCBP-204ENST00000447182 NXF1Q9UBU9 619 aaKnown RBP19.86■□□□□ 0.77
SDCBP-204ENST00000447182 ASB3Q9Y575 518 aa19.86■□□□□ 0.77
SDCBP-204ENST00000447182 FARP2O94887 1054 aaPredicted RBP19.85■□□□□ 0.77
SDCBP-204ENST00000447182 PTPRAP18433 802 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 MAGEA6P43360 314 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 TUBP50607 506 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 STAT5BP51692 787 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 HMGCS2P54868 508 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 ZNF280AP59817 542 aaPredicted RBP19.85■□□□□ 0.77
SDCBP-204ENST00000447182 SATB1Q01826 763 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 MMRN1Q13201 1228 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 FAM160B1Q5W0V3 765 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 CYP4V2Q6ZWL3 525 aaPredicted RBP19.85■□□□□ 0.77
SDCBP-204ENST00000447182 ALYREFQ86V81 257 aaKnown RBP19.85■□□□□ 0.77
SDCBP-204ENST00000447182 ZBTB8OSQ8IWT0 167 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 RAB3IL1Q8TBN0 382 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 CCDC110Q8TBZ0 833 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 POPDC2Q9HBU9 364 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 PTPRHQ9HD43 1115 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 ZNF112Q9UJU3 913 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 AHCYL1O43865 530 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 AVILO75366 819 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 GSTA2P09210 222 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 UBA1P22314 1058 aaKnown RBP19.85■□□□□ 0.77
SDCBP-204ENST00000447182 SP100P23497 879 aaPredicted RBP19.85■□□□□ 0.77
SDCBP-204ENST00000447182 CALRP27797 417 aaKnown RBP19.85■□□□□ 0.77
SDCBP-204ENST00000447182 RAP1GAPP47736 663 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 CDH6P55285 790 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 MXRA7P84157 204 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 CNTN2Q02246 1040 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 LAMTOR4Q0VGL1 99 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 MXD4Q14582 209 aaPredicted RBP19.85■□□□□ 0.77
SDCBP-204ENST00000447182 HSF5Q4G112 596 aaPredicted RBP19.85■□□□□ 0.77
SDCBP-204ENST00000447182 ZNF667Q5HYK9 610 aa19.85■□□□□ 0.77
SDCBP-204ENST00000447182 MPZL3Q6UWV2 235 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms