RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 LY6G5CQ5SRR4 150 aa25.93■■□□□ 1.74
PMS1-214ENST00000446877 KIAA1211LQ6NV74 962 aa25.93■■□□□ 1.74
PMS1-214ENST00000446877 SLC23A3Q6PIS1 610 aa25.93■■□□□ 1.74
PMS1-214ENST00000446877 TRMT11Q7Z4G4 463 aaKnown RBP25.93■■□□□ 1.74
PMS1-214ENST00000446877 C12orf40Q86WS4 652 aa25.93■■□□□ 1.74
PMS1-214ENST00000446877 NUP93Q8N1F7 819 aa25.93■■□□□ 1.74
PMS1-214ENST00000446877 PDZD8Q8NEN9 1154 aa25.93■■□□□ 1.74
PMS1-214ENST00000446877 OTUB2Q96DC9 234 aa25.93■■□□□ 1.74
PMS1-214ENST00000446877 TMEM121BQ9BXQ6 578 aaPredicted RBP25.93■■□□□ 1.74
PMS1-214ENST00000446877 ZDHHC4Q9NPG8 344 aa25.93■■□□□ 1.74
PMS1-214ENST00000446877 ZBTB24O43167 697 aaPredicted RBP25.92■■□□□ 1.74
PMS1-214ENST00000446877 RTN3O95197 1032 aaPredicted RBP25.92■■□□□ 1.74
PMS1-214ENST00000446877 RDXP35241 583 aaKnown RBP25.92■■□□□ 1.74
PMS1-214ENST00000446877 HOXD12P35452 270 aa25.92■■□□□ 1.74
PMS1-214ENST00000446877 WDR72Q3MJ13 1102 aa25.92■■□□□ 1.74
PMS1-214ENST00000446877 HDDC3Q8N4P3 179 aa25.92■■□□□ 1.74
PMS1-214ENST00000446877 CEP76Q8TAP6 659 aa25.92■■□□□ 1.74
PMS1-214ENST00000446877 KCNV2Q8TDN2 545 aa25.92■■□□□ 1.74
PMS1-214ENST00000446877 GATA6Q92908 595 aa25.92■■□□□ 1.74
PMS1-214ENST00000446877 ZNF518BQ9C0D4 1074 aa25.92■■□□□ 1.74
PMS1-214ENST00000446877 LRRC27Q9C0I9 530 aa25.92■■□□□ 1.74
PMS1-214ENST00000446877 PILRBQ9UKJ0 227 aa25.92■■□□□ 1.74
PMS1-214ENST00000446877 SH3BP1Q9Y3L3 701 aa25.92■■□□□ 1.74
PMS1-214ENST00000446877 THADAQ6YHU6 1953 aa25.92■■□□□ 1.74
PMS1-214ENST00000446877 A8MXQ7 604 aa25.91■■□□□ 1.74
PMS1-214ENST00000446877 AP5Z1O43299 807 aa25.91■■□□□ 1.74
PMS1-214ENST00000446877 ADAM23O75077 832 aa25.91■■□□□ 1.74
PMS1-214ENST00000446877 CST3P01034 146 aaPredicted RBP25.91■■□□□ 1.74
PMS1-214ENST00000446877 CACNA2D1P54289 1103 aa25.91■■□□□ 1.74
PMS1-214ENST00000446877 GFPT1Q06210 699 aaPredicted RBP25.91■■□□□ 1.74
PMS1-214ENST00000446877 NAT16Q8N8M0 369 aa25.91■■□□□ 1.74
PMS1-214ENST00000446877 RDH13Q8NBN7 331 aa25.91■■□□□ 1.74
PMS1-214ENST00000446877 ZCCHC14Q8WYQ9 949 aaKnown RBP25.91■■□□□ 1.74
PMS1-214ENST00000446877 FBXO32Q969P5 355 aa25.91■■□□□ 1.74
PMS1-214ENST00000446877 GTPBP2Q9BX10 602 aaKnown RBP25.91■■□□□ 1.74
PMS1-214ENST00000446877 DEC1Q9P2X7 70 aa25.91■■□□□ 1.74
PMS1-214ENST00000446877 SLC6A14Q9UN76 642 aa25.91■■□□□ 1.74
PMS1-214ENST00000446877 NEUROG3Q9Y4Z2 214 aa25.91■■□□□ 1.74
PMS1-214ENST00000446877 SPEGQ15772 3267 aa25.91■■□□□ 1.74
PMS1-214ENST00000446877 ITPKAP23677 461 aa25.9■■□□□ 1.74
PMS1-214ENST00000446877 SIM1P81133 766 aaPredicted RBP25.9■■□□□ 1.74
PMS1-214ENST00000446877 TRPC3Q13507 836 aa25.9■■□□□ 1.74
PMS1-214ENST00000446877 SNRNP35Q16560 246 aaKnown RBP25.9■■□□□ 1.74
PMS1-214ENST00000446877 DUOXA1Q1HG43 343 aa25.9■■□□□ 1.74
PMS1-214ENST00000446877 HECTD3Q5T447 861 aa25.9■■□□□ 1.74
PMS1-214ENST00000446877 SLC36A4Q6YBV0 504 aa25.9■■□□□ 1.74
PMS1-214ENST00000446877 PDILTQ8N807 584 aa25.9■■□□□ 1.74
PMS1-214ENST00000446877 OVCA2Q8WZ82 227 aa25.9■■□□□ 1.74
PMS1-214ENST00000446877 CCDC127Q96BQ5 260 aa25.9■■□□□ 1.74
PMS1-214ENST00000446877 DPEP3Q9H4B8 488 aa25.9■■□□□ 1.74
PMS1-214ENST00000446877 CHORDC1Q9UHD1 332 aaPredicted RBP25.9■■□□□ 1.74
PMS1-214ENST00000446877 NUP205Q92621 2012 aa25.9■■□□□ 1.74
PMS1-214ENST00000446877 ATXN2Q99700 1313 aaKnown RBP25.89■■□□□ 1.74
PMS1-214ENST00000446877 SRRM3A6NNA2 597 aaPredicted RBP25.89■■□□□ 1.74
PMS1-214ENST00000446877 CLDN5O00501 218 aa25.89■■□□□ 1.74
PMS1-214ENST00000446877 COCHO43405 550 aa25.89■■□□□ 1.74
PMS1-214ENST00000446877 HYAL3O43820 417 aaPredicted RBP25.89■■□□□ 1.74
PMS1-214ENST00000446877 CHRM1P11229 460 aaPredicted RBP25.89■■□□□ 1.74
PMS1-214ENST00000446877 RPL6Q02878 288 aaKnown RBP25.89■■□□□ 1.74
PMS1-214ENST00000446877 FAM173BQ6P4H8 233 aa25.89■■□□□ 1.74
PMS1-214ENST00000446877 RABEPKQ7Z6M1 372 aa25.89■■□□□ 1.74
PMS1-214ENST00000446877 ZNF513Q8N8E2 541 aaPredicted RBP25.89■■□□□ 1.74
PMS1-214ENST00000446877 B3GALNT2Q8NCR0 500 aa25.89■■□□□ 1.74
PMS1-214ENST00000446877 GLIS3Q8NEA6 775 aa25.89■■□□□ 1.74
PMS1-214ENST00000446877 HPS3Q969F9 1004 aa25.89■■□□□ 1.74
PMS1-214ENST00000446877 B3GNT5Q9BYG0 378 aa25.89■■□□□ 1.74
PMS1-214ENST00000446877 NACA2Q9H009 215 aa25.89■■□□□ 1.74
PMS1-214ENST00000446877 NXF1Q9UBU9 619 aaKnown RBP25.89■■□□□ 1.74
PMS1-214ENST00000446877 NME7Q9Y5B8 376 aa25.89■■□□□ 1.74
PMS1-214ENST00000446877 ZFYVE26Q68DK2 2539 aa25.89■■□□□ 1.73
PMS1-214ENST00000446877 ATP8B3O60423 1300 aa25.88■■□□□ 1.73
PMS1-214ENST00000446877 ANAPC1Q9H1A4 1944 aa25.88■■□□□ 1.73
PMS1-214ENST00000446877 A0A087X0B3 334 aa25.88■■□□□ 1.73
PMS1-214ENST00000446877 SPAARA0A1B0GVQ0 90 aa25.88■■□□□ 1.73
PMS1-214ENST00000446877 UPK3BL1B0FP48 263 aa25.88■■□□□ 1.73
PMS1-214ENST00000446877 UPK3BL2E5RIL1 263 aa25.88■■□□□ 1.73
PMS1-214ENST00000446877 SEMA3BQ13214 749 aa25.88■■□□□ 1.73
PMS1-214ENST00000446877 ANO4Q32M45 955 aa25.88■■□□□ 1.73
PMS1-214ENST00000446877 PIP4P1Q86T03 277 aa25.88■■□□□ 1.73
PMS1-214ENST00000446877 DEFB119Q8N690 84 aa25.88■■□□□ 1.73
PMS1-214ENST00000446877 CGRRF1Q99675 332 aa25.88■■□□□ 1.73
PMS1-214ENST00000446877 TMEM30AQ9NV96 361 aa25.88■■□□□ 1.73
PMS1-214ENST00000446877 HOXC11O43248 304 aaPredicted RBP25.87■■□□□ 1.73
PMS1-214ENST00000446877 TULP3O75386 442 aa25.87■■□□□ 1.73
PMS1-214ENST00000446877 PSMD6Q15008 389 aa25.87■■□□□ 1.73
PMS1-214ENST00000446877 C10orf76Q5T2E6 689 aa25.87■■□□□ 1.73
PMS1-214ENST00000446877 PEAR1Q5VY43 1037 aaPredicted RBP25.87■■□□□ 1.73
PMS1-214ENST00000446877 SDE2Q6IQ49 451 aa25.87■■□□□ 1.73
PMS1-214ENST00000446877 PHTF2Q8N3S3 785 aa25.87■■□□□ 1.73
PMS1-214ENST00000446877 MED10Q9BTT4 135 aa25.87■■□□□ 1.73
PMS1-214ENST00000446877 TNMDQ9H2S6 317 aa25.87■■□□□ 1.73
PMS1-214ENST00000446877 MSRB2Q9Y3D2 182 aa25.87■■□□□ 1.73
PMS1-214ENST00000446877 MYO16Q9Y6X6 1858 aa25.87■■□□□ 1.73
PMS1-214ENST00000446877 GON4LQ3T8J9 2241 aa25.87■■□□□ 1.73
PMS1-214ENST00000446877 AKAP13Q12802 2813 aa25.87■■□□□ 1.73
PMS1-214ENST00000446877 KIAA1549LQ6ZVL6 1849 aa25.86■■□□□ 1.73
PMS1-214ENST00000446877 H0Y626 953 aa25.86■■□□□ 1.73
PMS1-214ENST00000446877 EIF3DO15371 548 aaKnown RBP eCLIP25.86■■□□□ 1.73
PMS1-214ENST00000446877 OPHN1O60890 802 aa25.86■■□□□ 1.73
PMS1-214ENST00000446877 TRIM16O95361 564 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms