RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 IRF7Q92985 503 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 HSFY1Q96LI6 401 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 CDK5RAP1Q96SZ6 601 aaKnown RBP11.42□□□□□ -0.58
HDAC6-211ENST00000443563 NAA15Q9BXJ9 866 aaKnown RBP11.42□□□□□ -0.58
HDAC6-211ENST00000443563 LRRC4Q9HBW1 653 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 RTN4Q9NQC3 1192 aaKnown RBP11.42□□□□□ -0.58
HDAC6-211ENST00000443563 SLC2A4RGQ9NR83 387 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 FAM207AQ9NSI2 230 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-211ENST00000443563 CHORDC1Q9UHD1 332 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-211ENST00000443563 SIK3Q9Y2K2 1263 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 FHOD1Q9Y613 1164 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 USP3Q9Y6I4 520 aa11.42□□□□□ -0.58
HDAC6-211ENST00000443563 C2orf78A6NCI8 922 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 FOXN3O00409 490 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-211ENST00000443563 ZNF263O14978 683 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 CYP26A1O43174 497 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 ZDHHC11BP0C7U3 371 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 KRT9P35527 623 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 VIPR2P41587 438 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 ACADSBP45954 432 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 TKTL1P51854 596 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 SNX16P57768 344 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 POLR2FP61218 127 aaKnown RBP11.41□□□□□ -0.58
HDAC6-211ENST00000443563 PLCB2Q00722 1185 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 PKDCCQ504Y2 493 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 ARHGAP29Q52LW3 1261 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 RAB41Q5JT25 222 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 DPY19L2P1Q6NXN4 242 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 POTEHQ6S545 545 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 VITQ6UXI7 678 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 GPRIN1Q7Z2K8 1008 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 LUZP1Q86V48 1076 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 DDX42Q86XP3 938 aaKnown RBP eCLIP11.41□□□□□ -0.58
HDAC6-211ENST00000443563 FAM71AQ8IYT1 594 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 SIX6OS1Q8N1H7 587 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 UBA3Q8TBC4 463 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 BPIFB1Q8TDL5 484 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 STK32AQ8WU08 396 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 DNASE1L2Q92874 299 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 SPAG5Q96R06 1193 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 RPP25Q9BUL9 199 aaKnown RBP11.41□□□□□ -0.58
HDAC6-211ENST00000443563 NACA2Q9H009 215 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 GANQ9H2C0 597 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 EPHX3Q9H6B9 360 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 BRD9Q9H8M2 597 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 CYLDQ9NQC7 956 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 GMIPQ9P107 970 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 WNT16Q9UBV4 365 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 FBXL21Q9UKT6 434 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 CEP83Q9Y592 693 aa11.41□□□□□ -0.58
HDAC6-211ENST00000443563 KIF26AQ9ULI4 1882 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-211ENST00000443563 A0A1B0GTH6 734 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 A0A1W2PQC6 194 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 F8VZ95 297 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 CHADO15335 359 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 NARSO43776 548 aaKnown RBP11.4□□□□□ -0.58
HDAC6-211ENST00000443563 GPR37L1O60883 481 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 FBXO21O94952 628 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 PRAMEF12O95522 483 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 ZBED1O96006 694 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 OAS1P00973 400 aaKnown RBP11.4□□□□□ -0.58
HDAC6-211ENST00000443563 TPM3P06753 285 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 RALAP11233 206 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 TCF3P15923 654 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 GDI1P31150 447 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 CLCN1P35523 988 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 STAT1P42224 750 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 SLC7A9P82251 487 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 GOLGA8FQ08AF8 430 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 GOLGA8DPQ0D2H9 430 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 FCHO2Q0JRZ9 810 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 PM20D1Q6GTS8 502 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 CC2D1AQ6P1N0 951 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-211ENST00000443563 CACNA2D4Q7Z3S7 1137 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 SCML4Q8N228 414 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 ZNF276Q8N554 614 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 KIAA1958Q8N8K9 716 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 ARL14EPQ8N8R7 260 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-211ENST00000443563 CSGALNACT1Q8TDX6 532 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 SLC35F5Q8WV83 523 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 USP13Q92995 863 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-211ENST00000443563 SECISBP2LQ93073 1101 aaKnown RBP11.4□□□□□ -0.58
HDAC6-211ENST00000443563 SHDQ96IW2 340 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 NOX5Q96PH1 765 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 CYP2S1Q96SQ9 504 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 PLA2G2FQ9BZM2 168 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 PDCL3Q9H2J4 239 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 TRPV5Q9NQA5 729 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 CNGB3Q9NQW8 809 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 CLIC5Q9NZA1 410 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 NAGPAQ9UK23 515 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 AJAP1Q9UKB5 411 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-211ENST00000443563 PCDHGC3Q9UN70 934 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 ARHGAP26Q9UNA1 814 aa11.4□□□□□ -0.58
HDAC6-211ENST00000443563 TMEM221A6NGB7 291 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 M0R296 226 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 SART1O43290 800 aaKnown RBP11.39□□□□□ -0.59
HDAC6-211ENST00000443563 TLR5O60602 858 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 OLFM2O95897 454 aa11.39□□□□□ -0.59
HDAC6-211ENST00000443563 CFHP08603 1231 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms