RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 NPR3P17342 541 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 TSPY1Q01534 308 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 ITIH3Q06033 890 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 INTS6LQ5JSJ4 861 aaKnown RBP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 MFSD5Q6N075 450 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 ZNF572Q7Z3I7 529 aaPredicted RBP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 CPNE8Q86YQ8 564 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 MYLK4Q86YV6 388 aaPredicted RBP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 ZDHHC17Q8IUH5 632 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 SPATA4Q8NEY3 305 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 SPDYE1Q8NFV5 336 aaPredicted RBP8.48□□□□□ -1.05
CCDC39-201ENST00000442201 FNIP1Q8TF40 1166 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 PCED1BQ96HM7 432 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 RTP3Q9BQQ7 232 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 TMEM175Q9BSA9 504 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 RMI1Q9H9A7 625 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 EHD2Q9NZN4 543 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 ADAM28Q9UKQ2 775 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 USTQ9Y2C2 406 aa8.48□□□□□ -1.05
CCDC39-201ENST00000442201 PGRMC1O00264 195 aaKnown RBP8.47□□□□□ -1.05
CCDC39-201ENST00000442201 EFCAB14O75071 495 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 ITGB8P26012 769 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 MARCKSL1P49006 195 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 PEX5P50542 639 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 RNASE9P60153 205 aaKnown RBP8.47□□□□□ -1.05
CCDC39-201ENST00000442201 MAPRE1Q15691 268 aaKnown RBP8.47□□□□□ -1.05
CCDC39-201ENST00000442201 FAM183BPQ6ZVS7 135 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 PAQR9Q6ZVX9 377 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 YTHDF3Q7Z739 585 aaKnown RBP8.47□□□□□ -1.05
CCDC39-201ENST00000442201 FAM35AQ86V20 835 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 PIGZQ86VD9 579 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 JOSD2Q8TAC2 188 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 ACTRT1Q8TDG2 376 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 VWCEQ96DN2 955 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 PLVAPQ9BX97 442 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 B3GNT5Q9BYG0 378 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 KRT82Q9NSB4 513 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 SMARCAL1Q9NZC9 954 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 MYH10P35580 1976 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 SYN3O14994 580 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 PSMA2P25787 234 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 SLC11A1P49279 550 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 OGDHQ02218 1023 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 CLUL1Q15846 466 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 CWF19L1Q69YN2 538 aaKnown RBP8.47□□□□□ -1.05
CCDC39-201ENST00000442201 SCUBE3Q8IX30 993 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 RHOT1Q8IXI2 618 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 RASGEF1CQ8N431 466 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 EMC1Q8N766 993 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 NIPA2Q8N8Q9 360 aa8.47□□□□□ -1.05
CCDC39-201ENST00000442201 RNPC3Q96LT9 517 aaKnown RBP8.47□□□□□ -1.05
CCDC39-201ENST00000442201 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.47□□□□□ -1.05
CCDC39-201ENST00000442201 PAPSS1O43252 624 aaPredicted RBP8.46□□□□□ -1.05
CCDC39-201ENST00000442201 DGKIO75912 1065 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 OAZ2O95190 189 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 AMHP03971 560 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 GALTP07902 379 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 RPL34P49207 117 aaKnown RBP8.46□□□□□ -1.05
CCDC39-201ENST00000442201 SLC6A3Q01959 620 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 ZNF252P-AS1Q0IIN9 211 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 ELAVL2Q12926 359 aaKnown RBP8.46□□□□□ -1.05
CCDC39-201ENST00000442201 ZNF211Q13398 564 aaPredicted RBP8.46□□□□□ -1.05
CCDC39-201ENST00000442201 SEL1L2Q5TEA6 688 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 DCAF12L1Q5VU92 463 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 ARMC3Q5W041 872 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 FAM171BQ6P995 826 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 OLFML1Q6UWY5 402 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 CLEC20AQ6ZU45 233 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 SPATS2Q86XZ4 545 aaKnown RBP8.46□□□□□ -1.05
CCDC39-201ENST00000442201 NOA1Q8NC60 698 aaKnown RBP8.46□□□□□ -1.05
CCDC39-201ENST00000442201 OR10T2Q8NGX3 314 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 MYLPFQ96A32 169 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 SMARCD1Q96GM5 515 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 NAP1L3Q99457 506 aaPredicted RBP8.46□□□□□ -1.05
CCDC39-201ENST00000442201 IQCGQ9H095 443 aaKnown RBP8.46□□□□□ -1.05
CCDC39-201ENST00000442201 LRRC4Q9HBW1 653 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 TTC7AQ9ULT0 858 aaPredicted RBP8.46□□□□□ -1.05
CCDC39-201ENST00000442201 TET1Q8NFU7 2136 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 SF3B1O75533 1304 aaKnown RBP eCLIP8.46□□□□□ -1.05
CCDC39-201ENST00000442201 TANC1Q9C0D5 1861 aa8.46□□□□□ -1.05
CCDC39-201ENST00000442201 F8VP50 259 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 EBAG9O00559 213 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 PSTPIP1O43586 416 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 LCP1P13796 627 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 EN2P19622 333 aaPredicted RBP8.46□□□□□ -1.06
CCDC39-201ENST00000442201 BCAR1P56945 870 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 MAP3K7CLP57077 242 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 SFSWAPQ12872 951 aaKnown RBP8.46□□□□□ -1.06
CCDC39-201ENST00000442201 LAMB3Q13751 1172 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 FAM171A1Q5VUB5 890 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 KCTD13Q8WZ19 329 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 TOP1MTQ969P6 601 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 HCSTQ9UBK5 93 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 PRKAG2Q9UGJ0 569 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 GABBR2O75899 941 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 RNF8O76064 485 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 FGGP02679 453 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 PDGFRAP16234 1089 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 SCNN1AP37088 669 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 ALDH7A1P49419 539 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms