RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 CXCL9Q07325 125 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 UGCGQ16739 394 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 WDR44Q5JSH3 913 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 ZCCHC23Q6ZST2 131 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 EFCAB3Q8N7B9 438 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 RSAD2Q8WXG1 361 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 JDP2Q8WYK2 163 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 EHMT1Q9H9B1 1298 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 NPTX2P47972 431 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 SP4Q02446 784 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 PDK3Q15120 406 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 KCNT1Q5JUK3 1230 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 EFHC1Q5JVL4 640 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 GMLQ99445 158 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 KLHL4Q9C0H6 718 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 EXOC7Q9UPT5 735 aa21.13■□□□□ 0.97
SHOX2-203ENST00000441443 CTDP1Q9Y5B0 961 aaPredicted RBP21.13■□□□□ 0.97
SHOX2-203ENST00000441443 CCDC160A6NGH7 325 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 AVILO75366 819 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 DCUN1D2Q6PH85 259 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 UNC45BQ8IWX7 931 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 RTKN2Q8IZC4 609 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 SLC44A1Q8WWI5 657 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 LENG1Q96BZ8 264 aaPredicted RBP21.12■□□□□ 0.97
SHOX2-203ENST00000441443 DDX18Q9NVP1 670 aaKnown RBP21.12■□□□□ 0.97
SHOX2-203ENST00000441443 TMEM191CA6NGB0 347 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 E7ESA3 106 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 TMEM191BP0C7N4 346 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 TNNI1P19237 187 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 CPOXP36551 454 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 QARSP47897 775 aaKnown RBP21.12■□□□□ 0.97
SHOX2-203ENST00000441443 WNT7BP56706 349 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 TRIP10Q15642 601 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 PRAMEF18Q5VWM3 479 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 FBXL19Q6PCT2 694 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 MXRA8Q9BRK3 442 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 ZDHHC7Q9NXF8 308 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 TCEAL9Q9UHQ7 104 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 SOX13Q9UN79 622 aa21.12■□□□□ 0.97
SHOX2-203ENST00000441443 ZSCAN9O15535 394 aaPredicted RBP21.11■□□□□ 0.97
SHOX2-203ENST00000441443 HLA-DRAP01903 254 aa21.11■□□□□ 0.97
SHOX2-203ENST00000441443 PHF13Q86YI8 300 aaPredicted RBP21.11■□□□□ 0.97
SHOX2-203ENST00000441443 PPM1NQ8N819 430 aa21.11■□□□□ 0.97
SHOX2-203ENST00000441443 FAM71DQ8N9W8 422 aa21.11■□□□□ 0.97
SHOX2-203ENST00000441443 ST6GALNAC4Q9H4F1 302 aa21.11■□□□□ 0.97
SHOX2-203ENST00000441443 CYP4F11Q9HBI6 524 aa21.11■□□□□ 0.97
SHOX2-203ENST00000441443 MYH9P35579 1960 aaKnown RBP21.11■□□□□ 0.97
SHOX2-203ENST00000441443 CST8O60676 142 aa21.11■□□□□ 0.97
SHOX2-203ENST00000441443 ASNSP08243 561 aa21.11■□□□□ 0.97
SHOX2-203ENST00000441443 XKR9Q5GH70 373 aa21.11■□□□□ 0.97
SHOX2-203ENST00000441443 MAP4K3Q8IVH8 894 aa21.11■□□□□ 0.97
SHOX2-203ENST00000441443 RIT2Q99578 217 aa21.11■□□□□ 0.97
SHOX2-203ENST00000441443 KLF11O14901 512 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 ACO1P21399 889 aaKnown RBP21.1■□□□□ 0.97
SHOX2-203ENST00000441443 SERPINB6P35237 376 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 SNRPFP62306 86 aaKnown RBP21.1■□□□□ 0.97
SHOX2-203ENST00000441443 IRX4P78413 519 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 BMPR2Q13873 1038 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 GRM2Q14416 872 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 KYAT3Q6YP21 454 aaKnown RBP21.1■□□□□ 0.97
SHOX2-203ENST00000441443 RBM44Q6ZP01 1051 aaKnown RBP21.1■□□□□ 0.97
SHOX2-203ENST00000441443 CFAP36Q96G28 342 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 C7orf26Q96N11 449 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 FEM1BQ9UK73 627 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 HNRNPDLO14979 420 aaKnown RBP21.1■□□□□ 0.97
SHOX2-203ENST00000441443 IL1BP01584 269 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 WEE2P0C1S8 567 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 CCNIQ14094 377 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 GRAMD1BQ3KR37 738 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 USP37Q86T82 979 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 NUDCD3Q8IVD9 361 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 BSNDQ8WZ55 320 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 GCNAQ96QF7 691 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 KMT5AQ9NQR1 393 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 ASTN2O75129 1339 aaPredicted RBP21.1■□□□□ 0.97
SHOX2-203ENST00000441443 GTF2H1P32780 548 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 CHN2P52757 468 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 MRPS5P82675 430 aaKnown RBP21.1■□□□□ 0.97
SHOX2-203ENST00000441443 DPY19L2Q6NUT2 758 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 NCAPG2Q86XI2 1143 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 CRLF3Q8IUI8 442 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 APOBEC3GQ9HC16 384 aaKnown RBP21.1■□□□□ 0.97
SHOX2-203ENST00000441443 PLLPQ9Y342 182 aa21.1■□□□□ 0.97
SHOX2-203ENST00000441443 IMPDH2P12268 514 aa21.09■□□□□ 0.97
SHOX2-203ENST00000441443 C1QBPQ07021 282 aaKnown RBP21.09■□□□□ 0.97
SHOX2-203ENST00000441443 ATG16L1Q676U5 607 aa21.09■□□□□ 0.97
SHOX2-203ENST00000441443 AAGABQ6PD74 315 aa21.09■□□□□ 0.97
SHOX2-203ENST00000441443 DENND5BQ6ZUT9 1274 aa21.09■□□□□ 0.97
SHOX2-203ENST00000441443 FAM160B2Q86V87 743 aa21.09■□□□□ 0.97
SHOX2-203ENST00000441443 GPD1LQ8N335 351 aa21.09■□□□□ 0.97
SHOX2-203ENST00000441443 VCPIP1Q96JH7 1222 aa21.09■□□□□ 0.97
SHOX2-203ENST00000441443 FBXL18Q96ME1 805 aa21.09■□□□□ 0.97
SHOX2-203ENST00000441443 SMIM31A0A1B0GVY4 71 aa21.09■□□□□ 0.97
SHOX2-203ENST00000441443 TESPA1A2RU30 521 aaPredicted RBP21.09■□□□□ 0.97
SHOX2-203ENST00000441443 DHX15O43143 795 aaKnown RBP21.09■□□□□ 0.97
SHOX2-203ENST00000441443 TOP3BO95985 862 aaKnown RBP21.09■□□□□ 0.97
SHOX2-203ENST00000441443 TDRD10Q5VZ19 366 aaKnown RBP21.09■□□□□ 0.97
SHOX2-203ENST00000441443 APOL6Q9BWW8 343 aa21.09■□□□□ 0.97
SHOX2-203ENST00000441443 C15orf38-AP3S2A0A0A6YYH1 394 aa21.08■□□□□ 0.97
SHOX2-203ENST00000441443 VILLO15195 856 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms