RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 SMC1AQ14683 1233 aaKnown RBP20■□□□□ 0.79
SNX17-203ENST00000440760 ZNF280DQ6N043 979 aa20■□□□□ 0.79
SNX17-203ENST00000440760 FBXO38Q6PIJ6 1188 aa20■□□□□ 0.79
SNX17-203ENST00000440760 PRSS55Q6UWB4 352 aaPredicted RBP20■□□□□ 0.79
SNX17-203ENST00000440760 RSPO2Q6UXX9 243 aaPredicted RBP20■□□□□ 0.79
SNX17-203ENST00000440760 C7orf61Q8IZ16 206 aa20■□□□□ 0.79
SNX17-203ENST00000440760 FAM172AQ8WUF8 416 aa20■□□□□ 0.79
SNX17-203ENST00000440760 HEMGNQ9BXL5 484 aa20■□□□□ 0.79
SNX17-203ENST00000440760 ASNSD1Q9NWL6 643 aa20■□□□□ 0.79
SNX17-203ENST00000440760 RNF8O76064 485 aa19.99■□□□□ 0.79
SNX17-203ENST00000440760 USP17L7P0C7H9 530 aa19.99■□□□□ 0.79
SNX17-203ENST00000440760 RALAP11233 206 aa19.99■□□□□ 0.79
SNX17-203ENST00000440760 ATXN1P54253 815 aaKnown RBP19.99■□□□□ 0.79
SNX17-203ENST00000440760 MRPL58Q14197 206 aaKnown RBP19.99■□□□□ 0.79
SNX17-203ENST00000440760 RAB41Q5JT25 222 aa19.99■□□□□ 0.79
SNX17-203ENST00000440760 C4orf50Q6ZRC1 276 aa19.99■□□□□ 0.79
SNX17-203ENST00000440760 TTC9BQ8N6N2 239 aa19.99■□□□□ 0.79
SNX17-203ENST00000440760 RAPGEF5Q92565 580 aa19.99■□□□□ 0.79
SNX17-203ENST00000440760 MRPL42Q9Y6G3 142 aaKnown RBP19.99■□□□□ 0.79
SNX17-203ENST00000440760 SCNN1AP37088 669 aa19.99■□□□□ 0.79
SNX17-203ENST00000440760 DAOAP59103 153 aa19.99■□□□□ 0.79
SNX17-203ENST00000440760 PITX1P78337 314 aaPredicted RBP19.99■□□□□ 0.79
SNX17-203ENST00000440760 IFRD2Q12894 506 aaPredicted RBP19.99■□□□□ 0.79
SNX17-203ENST00000440760 BTG3Q14201 252 aaPredicted RBP19.99■□□□□ 0.79
SNX17-203ENST00000440760 LRRC38Q5VT99 294 aa19.99■□□□□ 0.79
SNX17-203ENST00000440760 CYP4V2Q6ZWL3 525 aaPredicted RBP19.99■□□□□ 0.79
SNX17-203ENST00000440760 DEFB106AQ8N104 65 aa19.99■□□□□ 0.79
SNX17-203ENST00000440760 EXD1Q8NHP7 514 aa19.99■□□□□ 0.79
SNX17-203ENST00000440760 NAP1L3Q99457 506 aaPredicted RBP19.99■□□□□ 0.79
SNX17-203ENST00000440760 DMGDHQ9UI17 866 aaKnown RBP19.99■□□□□ 0.79
SNX17-203ENST00000440760 USP18Q9UMW8 372 aa19.99■□□□□ 0.79
SNX17-203ENST00000440760 LRRD1A4D1F6 860 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 YJEFN3A6XGL0 299 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 E7ENQ6 273 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 ZRANB2O95218 330 aaKnown RBP eCLIP19.98■□□□□ 0.79
SNX17-203ENST00000440760 CPB1P15086 417 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 GPR15P49685 360 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 EPHB4P54760 987 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 VSNL1P62760 191 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 SIX1Q15475 284 aaPredicted RBP19.98■□□□□ 0.79
SNX17-203ENST00000440760 SDHAF4Q5VUM1 108 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 KCNT2Q6UVM3 1135 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 MFSD7Q6UXD7 560 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 ZNF365Q70YC5 407 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 SCN4BQ8IWT1 228 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 DCP1BQ8IZD4 617 aaKnown RBP19.98■□□□□ 0.79
SNX17-203ENST00000440760 PRELID2Q8N945 189 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 HSPH1Q92598 858 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 IGSF21Q96ID5 467 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 SLITRK1Q96PX8 696 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 TTPALQ9BTX7 342 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 CALCOCO1Q9P1Z2 691 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 PRKAG2Q9UGJ0 569 aa19.98■□□□□ 0.79
SNX17-203ENST00000440760 ZSCAN5CA6NGD5 496 aaPredicted RBP19.97■□□□□ 0.79
SNX17-203ENST00000440760 RAD51CO43502 376 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 HSF2BPO75031 334 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 DAB1O75553 588 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 TRUB2O95900 331 aaKnown RBP19.97■□□□□ 0.79
SNX17-203ENST00000440760 KRT10P13645 584 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 SYN1P17600 705 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 CAPN2P17655 700 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 GRIK1P39086 918 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 HDAC4P56524 1084 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 ELAVL2Q12926 359 aaKnown RBP19.97■□□□□ 0.79
SNX17-203ENST00000440760 HADHQ16836 314 aaKnown RBP19.97■□□□□ 0.79
SNX17-203ENST00000440760 EFHC1Q5JVL4 640 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 KAZNQ674X7 775 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 SCYL2Q6P3W7 929 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 BHLHA9Q7RTU4 235 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 POLNQ7Z5Q5 900 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 ATAD1Q8NBU5 361 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 SCAMP5Q8TAC9 235 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 YME1L1Q96TA2 773 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 TBCBQ99426 244 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 PLVAPQ9BX97 442 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 EFCAB14O75071 495 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 BAIAP3O94812 1187 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 CD48P09326 243 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 RARAP10276 462 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 TUBB4BP68371 445 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 RBM10P98175 930 aaKnown RBP19.97■□□□□ 0.79
SNX17-203ENST00000440760 FPGSQ05932 587 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 ADCY2Q08462 1091 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 DCAF6Q58WW2 860 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 OTUD1Q5VV17 481 aaPredicted RBP19.97■□□□□ 0.79
SNX17-203ENST00000440760 C11orf84Q9BUA3 381 aaPredicted RBP19.97■□□□□ 0.79
SNX17-203ENST00000440760 OSBPL8Q9BZF1 889 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 GPATCH2LQ9NWQ4 482 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.97■□□□□ 0.79
SNX17-203ENST00000440760 AMACRQ9UHK6 382 aa19.97■□□□□ 0.79
SNX17-203ENST00000440760 GOLGA6L10A0A0M3HER8 536 aa19.96■□□□□ 0.79
SNX17-203ENST00000440760 CCDC188H7C350 402 aa19.96■□□□□ 0.79
SNX17-203ENST00000440760 C2CD2LO14523 706 aa19.96■□□□□ 0.79
SNX17-203ENST00000440760 SART1O43290 800 aaKnown RBP19.96■□□□□ 0.79
SNX17-203ENST00000440760 SOAT2O75908 522 aa19.96■□□□□ 0.79
SNX17-203ENST00000440760 ZBED1O96006 694 aa19.96■□□□□ 0.79
SNX17-203ENST00000440760 RPL17P18621 184 aaKnown RBP19.96■□□□□ 0.79
SNX17-203ENST00000440760 PCK1P35558 622 aa19.96■□□□□ 0.79
SNX17-203ENST00000440760 PTPN9P43378 593 aa19.96■□□□□ 0.79
SNX17-203ENST00000440760 SULT1E1P49888 294 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms