RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 DNAJC16Q9Y2G8 782 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 TMED5Q9Y3A6 229 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 PCDHB2Q9Y5E7 798 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 C15orf38-AP3S2A0A0A6YYH1 394 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 KCNA2P16389 499 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 NT5C2P49902 561 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 EIF3EP60228 445 aaKnown RBP12.15□□□□□ -0.46
SMPD4-209ENST00000439886 DMP1Q13316 513 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-209ENST00000439886 LSAMPQ13449 338 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 MAMLD1Q13495 774 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 ZNF568Q3ZCX4 644 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 SCYL2Q6P3W7 929 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 ANO5Q75V66 913 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 ARPINQ7Z6K5 226 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 SKA1Q96BD8 255 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 ALKBH8Q96BT7 664 aaKnown RBP12.15□□□□□ -0.46
SMPD4-209ENST00000439886 TLE6Q9H808 572 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 TMEM8AQ9HCN3 771 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 S100A14Q9HCY8 104 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 SLC9A2Q9UBY0 812 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 INPP5FQ9Y2H2 1132 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 NEMP1O14524 444 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 SLC26A4O43511 780 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 TBC1D12O60347 775 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 UQCRBP14927 111 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 CHN2P52757 468 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 ACTR3P61158 418 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 CDO1Q16878 200 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 EML3Q32P44 896 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 HSP90AA5PQ58FG0 334 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 C1orf220Q5T0J3 134 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 LGSNQ5TDP6 509 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 LRRC8BQ6P9F7 803 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 CDHR3Q6ZTQ4 885 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 SESTD1Q86VW0 696 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 ZNF398Q8TD17 642 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 IFT43Q96FT9 208 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 APOPT1Q96IL0 206 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 KCNK13Q9HB14 408 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 ACSS2Q9NR19 701 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 MAN1C1Q9NR34 630 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 RAB6BQ9NRW1 208 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 PIH1D1Q9NWS0 290 aaKnown RBP12.15□□□□□ -0.46
SMPD4-209ENST00000439886 PRR12Q9ULL5 1215 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 LZTS1Q9Y250 596 aa12.15□□□□□ -0.46
SMPD4-209ENST00000439886 TESPA1A2RU30 521 aaPredicted RBP12.15□□□□□ -0.47
SMPD4-209ENST00000439886 PSTPIP1O43586 416 aa12.15□□□□□ -0.47
SMPD4-209ENST00000439886 MTA2O94776 668 aa12.15□□□□□ -0.47
SMPD4-209ENST00000439886 RBP3P10745 1247 aa12.15□□□□□ -0.47
SMPD4-209ENST00000439886 LIG4P49917 911 aa12.15□□□□□ -0.47
SMPD4-209ENST00000439886 PPP2R5DQ14738 602 aa12.15□□□□□ -0.47
SMPD4-209ENST00000439886 EFHC2Q5JST6 749 aa12.15□□□□□ -0.47
SMPD4-209ENST00000439886 RNASEH2BQ5TBB1 312 aaKnown RBP12.15□□□□□ -0.47
SMPD4-209ENST00000439886 VWA5B1Q5TIE3 1220 aa12.15□□□□□ -0.47
SMPD4-209ENST00000439886 NXNQ6DKJ4 435 aa12.15□□□□□ -0.47
SMPD4-209ENST00000439886 CDC42EP5Q6NZY7 148 aa12.15□□□□□ -0.47
SMPD4-209ENST00000439886 EMC1Q8N766 993 aa12.15□□□□□ -0.47
SMPD4-209ENST00000439886 HSPBAP1Q96EW2 488 aa12.15□□□□□ -0.47
SMPD4-209ENST00000439886 SLITRK1Q96PX8 696 aa12.15□□□□□ -0.47
SMPD4-209ENST00000439886 FOXP3Q9BZS1 431 aa12.15□□□□□ -0.47
SMPD4-209ENST00000439886 EHMT1Q9H9B1 1298 aa12.15□□□□□ -0.47
SMPD4-209ENST00000439886 IP6K2Q9UHH9 426 aa12.15□□□□□ -0.47
SMPD4-209ENST00000439886 TRIM64CA6NLI5 447 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 STAM2O75886 525 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 HLA-DRAP01903 254 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 ASLP04424 464 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 APRTP07741 180 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 RPL22P35268 128 aaKnown RBP12.14□□□□□ -0.47
SMPD4-209ENST00000439886 COPAP53621 1224 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 NCKAP1LP55160 1127 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 INAQ16352 499 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 SLC2A7Q6PXP3 512 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 UNC45BQ8IWX7 931 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 CASP10Q92851 521 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 FIZ1Q96SL8 496 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 IMPG2Q9BZV3 1241 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 PARVAQ9NVD7 372 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 ADAMTS6Q9UKP5 1117 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 CARD8Q9Y2G2 431 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 HEMK1Q9Y5R4 338 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-209ENST00000439886 ZHX2Q9Y6X8 837 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 ATP8B3O60423 1300 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 MCF2LO15068 1137 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 UGT1A9O60656 530 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 EIF2AK2P19525 551 aaKnown RBP12.14□□□□□ -0.47
SMPD4-209ENST00000439886 GRIA2P42262 883 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 PPIDQ08752 370 aaKnown RBP12.14□□□□□ -0.47
SMPD4-209ENST00000439886 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-209ENST00000439886 CMPK2Q5EBM0 449 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 B3GNT6Q6ZMB0 384 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 ACAD11Q709F0 780 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 PPP4R1Q8TF05 950 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 ACSS3Q9H6R3 686 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 DBNDD1Q9H9R9 158 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 UGT1A7Q9HAW7 530 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 UGT1A10Q9HAW8 530 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 UGT1A8Q9HAW9 530 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 IL1RAPL1Q9NZN1 696 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 SCINQ9Y6U3 715 aa12.14□□□□□ -0.47
SMPD4-209ENST00000439886 TCRBV9S1A1TA0A576 114 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms