RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 SLC12A3P55017 1021 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 KPNB1Q14974 876 aaKnown RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 CDO1Q16878 200 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 IMPG1Q17R60 797 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 EXOC3L1Q86VI1 746 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 TERB1Q8NA31 727 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 CEP70Q8NHQ1 597 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 MAGEC3Q8TD91 643 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 GIMAP1Q8WWP7 306 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 SLC5A5Q92911 643 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 FAR2Q96K12 515 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 SLC4A9Q96Q91 983 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 CBWD1Q9BRT8 395 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 APOL6Q9BWW8 343 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 DNAJC18Q9H819 358 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 ACAD9Q9H845 621 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 TMEM8AQ9HCN3 771 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 HEY1Q9Y5J3 304 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 DPPA5A6NC42 116 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 MAGEA13PA6NCF6 341 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 ASB14A6NK59 587 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 CCNCP24863 283 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 EPHB2P29323 1055 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 GEMIN4P57678 1058 aaKnown RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 PRAMEP78395 509 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 RRP1BQ14684 758 aaKnown RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 SLC47A2Q86VL8 602 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 GALNT6Q8NCL4 622 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 NPLOC4Q8TAT6 608 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 STK32AQ8WU08 396 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 SNX19Q92543 992 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 SNX27Q96L92 541 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 MYLK2Q9H1R3 596 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 KCTD10Q9H3F6 313 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 NINJ2Q9NZG7 142 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 PCYOX1Q9UHG3 505 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 VPS9D1Q9Y2B5 631 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 PCDHA3Q9Y5H8 950 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 KANSL1LA0AUZ9 987 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 CCDC78A2IDD5 438 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 M0QYV0 167 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 ZC3H11AO75152 810 aaKnown RBP eCLIP6.59□□□□□ -1.35
BDNF-211ENST00000439476 SNRPAP09012 282 aaKnown RBP6.59□□□□□ -1.35
BDNF-211ENST00000439476 SPRP35270 261 aaPredicted RBP6.59□□□□□ -1.35
BDNF-211ENST00000439476 SREBF1P36956 1147 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 VASPP50552 380 aaPredicted RBP6.59□□□□□ -1.35
BDNF-211ENST00000439476 OSTNP61366 133 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 NCALDP61601 193 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 NFX1Q12986 1120 aaKnown RBP6.59□□□□□ -1.35
BDNF-211ENST00000439476 STX3Q13277 289 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 KRR1Q13601 381 aaKnown RBP6.59□□□□□ -1.35
BDNF-211ENST00000439476 STK11Q15831 433 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 SGSM1Q2NKQ1 1148 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 CBWD6Q4V339 395 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 TJAP1Q5JTD0 557 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 CBWD3Q5JTY5 395 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 SLC27A3Q5K4L6 730 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 CBWD5Q5RIA9 395 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 SYCP2LQ5T4T6 812 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 ZNF772Q68DY9 489 aaPredicted RBP6.59□□□□□ -1.35
BDNF-211ENST00000439476 CDC42EP5Q6NZY7 148 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 UNC5DQ6UXZ4 953 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 RASGEF1CQ8N431 466 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 RYBPQ8N488 228 aaPredicted RBP6.59□□□□□ -1.35
BDNF-211ENST00000439476 TTLL6Q8N841 843 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 GOLM1Q8NBJ4 401 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 LINC00116Q8NCU8 138 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 DDI1Q8WTU0 396 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 NLRP4Q96MN2 994 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 MRPL1Q9BYD6 325 aaKnown RBP6.59□□□□□ -1.35
BDNF-211ENST00000439476 MTMR12Q9C0I1 747 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 ANLNQ9NQW6 1124 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 ZC4H2Q9NQZ6 224 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 TBC1D23Q9NUY8 699 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 NDFIP2Q9NV92 336 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 GRID1Q9ULK0 1009 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 PCDHGB4Q9UN71 923 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 ZNF142P52746 1687 aaPredicted RBP6.59□□□□□ -1.35
BDNF-211ENST00000439476 MYH8P13535 1937 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 MAGEB2O15479 319 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 ENTPD3O75355 529 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 CBX6O95503 412 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 S100A1P23297 94 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 MARCKSL1P49006 195 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 EIF3EP60228 445 aaKnown RBP6.59□□□□□ -1.35
BDNF-211ENST00000439476 MTFR1Q15390 333 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 ECM1Q16610 540 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 ASTE1Q2TB18 679 aaPredicted RBP6.59□□□□□ -1.35
BDNF-211ENST00000439476 WDR45BQ5MNZ6 344 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 WASHC2DQ5SRD0 308 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 SP8Q8IXZ3 490 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 THNSL1Q8IYQ7 743 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 RBM46Q8TBY0 533 aaKnown RBP6.59□□□□□ -1.35
BDNF-211ENST00000439476 IPCEF1Q8WWN9 437 aaPredicted RBP6.59□□□□□ -1.35
BDNF-211ENST00000439476 ALG3Q92685 438 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 FGFBP2Q9BYJ0 223 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 RNPEPL1Q9HAU8 725 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 FANCFQ9NPI8 374 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 LRRC4BQ9NT99 713 aa6.59□□□□□ -1.35
BDNF-211ENST00000439476 RNF146Q9NTX7 359 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms