RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 TPRG1Q6ZUI0 275 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 BHLHA9Q7RTU4 235 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 PIGZQ86VD9 579 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 SUGP1Q8IWZ8 645 aaKnown RBP14.02□□□□□ -0.17
LINC00399-201ENST00000439008 CCDC105Q8IYK2 499 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 TTC39CQ8N584 583 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 ANKRD52Q8NB46 1076 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 RBBP8NLQ8NC74 664 aaPredicted RBP14.02□□□□□ -0.17
LINC00399-201ENST00000439008 UBA3Q8TBC4 463 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 SH3RF2Q8TEC5 729 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 NDRG1Q92597 394 aaKnown RBP14.02□□□□□ -0.17
LINC00399-201ENST00000439008 DNASE1L2Q92874 299 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 IRF7Q92985 503 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 TUBGCP2Q9BSJ2 902 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 LINC00597Q9H2U6 94 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 NDST4Q9H3R1 872 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 FAM124BQ9H5Z6 455 aaPredicted RBP14.02□□□□□ -0.17
LINC00399-201ENST00000439008 UBE2TQ9NPD8 197 aaPredicted RBP14.02□□□□□ -0.17
LINC00399-201ENST00000439008 FANCLQ9NW38 375 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 TSPAN16Q9UKR8 245 aa14.02□□□□□ -0.17
LINC00399-201ENST00000439008 KANSL1LA0AUZ9 987 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 TBX18O95935 607 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 CD19P15391 556 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 SLC7A9P82251 487 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 PFKPQ01813 784 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 TCF15Q12870 199 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 EXOC3L4Q17RC7 722 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 VWA3BQ502W6 1294 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 SGO2Q562F6 1265 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 CT47A1Q5JQC4 288 aaPredicted RBP14.01□□□□□ -0.17
LINC00399-201ENST00000439008 RAB41Q5JT25 222 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 CAVIN1Q6NZI2 390 aaKnown RBP14.01□□□□□ -0.17
LINC00399-201ENST00000439008 PJA1Q8NG27 643 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 OVCA2Q8WZ82 227 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 SLITRK1Q96PX8 696 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 EBF3Q9H4W6 596 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 PNPLA8Q9NP80 782 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 LTB4R2Q9NPC1 389 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 SMPD4Q9NXE4 827 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 TAB2Q9NYJ8 693 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 DACH1Q9UI36 760 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 ZMYM5Q9UJ78 669 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 NUDT5Q9UKK9 219 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 ARHGAP26Q9UNA1 814 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 SCML2Q9UQR0 700 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 WNT6Q9Y6F9 365 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 USP3Q9Y6I4 520 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 PIAS3Q9Y6X2 628 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 ATG2BQ96BY7 2078 aa14.01□□□□□ -0.17
LINC00399-201ENST00000439008 A0A1W2PQH9 124 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 GTPBP10A4D1E9 387 aaKnown RBP14□□□□□ -0.17
LINC00399-201ENST00000439008 LEFTY2O00292 366 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 STK25O00506 426 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 PAEPP09466 180 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 PNMA6AP0CW24 399 aaPredicted RBP14□□□□□ -0.17
LINC00399-201ENST00000439008 VDRP11473 427 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 PRKCSHP14314 528 aaPredicted RBP14□□□□□ -0.17
LINC00399-201ENST00000439008 TCF3P15923 654 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 PPP3CCP48454 512 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 YWHAEP62258 255 aaKnown RBP14□□□□□ -0.17
LINC00399-201ENST00000439008 PRKCQQ04759 706 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 TYRO3Q06418 890 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 CETN1Q12798 172 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 MTF1Q14872 753 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 KRT31Q15323 416 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 STX1AQ16623 288 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 ARHGAP29Q52LW3 1261 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 SASS6Q6UVJ0 657 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 LCLAT1Q6UWP7 414 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 GBP6Q6ZN66 633 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 APTXQ7Z2E3 356 aaKnown RBP14□□□□□ -0.17
LINC00399-201ENST00000439008 YAF2Q8IY57 180 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 TTC16Q8NEE8 873 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 FUCA2Q9BTY2 467 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 KIF9Q9HAQ2 790 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 ANO10Q9NW15 660 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 COMMD8Q9NX08 183 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 WDR3Q9UNX4 943 aaKnown RBP eCLIP14□□□□□ -0.17
LINC00399-201ENST00000439008 CPQQ9Y646 472 aa14□□□□□ -0.17
LINC00399-201ENST00000439008 MYO15AQ9UKN7 3530 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 FAM170BA6NMN3 283 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 MDM4O15151 490 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 GREM1O60565 184 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 KLK7P49862 253 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 UBXN2BQ14CS0 331 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 CNGA2Q16280 664 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 ARHGAP44Q17R89 818 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 GAB4Q2WGN9 574 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 EML3Q32P44 896 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 HECTD3Q5T447 861 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 PMF1Q6P1K2 205 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 CCDC186Q7Z3E2 898 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 FAM114A1Q8IWE2 563 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 SHC3Q92529 594 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 UBXN6Q9BZV1 441 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 VPS16Q9H269 839 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 FBXO44Q9H4M3 255 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 EHD2Q9NZN4 543 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 APEX2Q9UBZ4 518 aa13.99□□□□□ -0.17
LINC00399-201ENST00000439008 SIT1Q9Y3P8 196 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms